Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   C2H94_RS01735 Genome accession   NZ_CP026034
Coordinates   292193..292489 (-) Length   98 a.a.
NCBI ID   WP_003230162.1    Uniprot ID   A0A809FGR8
Organism   Bacillus subtilis strain PK5_52     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 287193..297489
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H94_RS01690 (C2H94_01675) tasA 287600..288385 (-) 786 WP_014477324.1 biofilm matrix protein TasA -
  C2H94_RS01695 (C2H94_01680) sipW 288450..289022 (-) 573 WP_003246088.1 signal peptidase I SipW -
  C2H94_RS01700 (C2H94_01685) tapA 289006..289767 (-) 762 WP_032726156.1 amyloid fiber anchoring/assembly protein TapA -
  C2H94_RS01705 (C2H94_01690) yqzG 290038..290364 (+) 327 WP_038829733.1 YqzG/YhdC family protein -
  C2H94_RS01710 (C2H94_01695) spoIIT 290406..290585 (-) 180 WP_014480252.1 YqzE family protein -
  C2H94_RS01715 (C2H94_01700) comGG 290657..291031 (-) 375 WP_032726157.1 ComG operon protein ComGG Machinery gene
  C2H94_RS01720 (C2H94_01705) comGF 291032..291415 (-) 384 WP_032726158.1 ComG operon protein ComGF Machinery gene
  C2H94_RS01725 (C2H94_01710) comGE 291441..291788 (-) 348 WP_063335293.1 ComG operon protein 5 Machinery gene
  C2H94_RS01730 (C2H94_01715) comGD 291772..292203 (-) 432 WP_032726159.1 competence type IV pilus minor pilin ComGD Machinery gene
  C2H94_RS01735 (C2H94_01720) comGC 292193..292489 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  C2H94_RS01740 (C2H94_01725) comGB 292503..293540 (-) 1038 WP_103803302.1 comG operon protein ComGB Machinery gene
  C2H94_RS01745 (C2H94_01730) comGA 293527..294597 (-) 1071 WP_070547533.1 competence protein ComGA Machinery gene
  C2H94_RS01750 (C2H94_01735) - 294808..295005 (-) 198 WP_103803301.1 hypothetical protein -
  C2H94_RS01755 (C2H94_01740) corA 295007..295960 (-) 954 WP_004399136.1 magnesium transporter CorA -
  C2H94_RS01760 (C2H94_01745) yqhB 296103..297431 (+) 1329 WP_021480026.1 hemolysin family protein -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10849.74 Da        Isoelectric Point: 6.7083

>NTDB_id=265434 C2H94_RS01735 WP_003230162.1 292193..292489(-) (comGC) [Bacillus subtilis strain PK5_52]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH

Nucleotide


Download         Length: 297 bp        

>NTDB_id=265434 C2H94_RS01735 WP_003230162.1 292193..292489(-) (comGC) [Bacillus subtilis strain PK5_52]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATTGTGCTCTTTATTATTTCGATCTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTGCAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGGCAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A809FGR8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

100

100

1
  comGC Staphylococcus aureus MW2

41.304

93.878

0.388
  comGC Staphylococcus aureus N315

41.304

93.878

0.388
  comYC Streptococcus suis isolate S10

49.333

76.531

0.378

Multiple sequence alignment