Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | C2H94_RS01740 | Genome accession | NZ_CP026034 |
| Coordinates | 292503..293540 (-) | Length | 345 a.a. |
| NCBI ID | WP_103803302.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain PK5_52 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 287503..298540
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H94_RS01690 (C2H94_01675) | tasA | 287600..288385 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| C2H94_RS01695 (C2H94_01680) | sipW | 288450..289022 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| C2H94_RS01700 (C2H94_01685) | tapA | 289006..289767 (-) | 762 | WP_032726156.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C2H94_RS01705 (C2H94_01690) | yqzG | 290038..290364 (+) | 327 | WP_038829733.1 | YqzG/YhdC family protein | - |
| C2H94_RS01710 (C2H94_01695) | spoIIT | 290406..290585 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| C2H94_RS01715 (C2H94_01700) | comGG | 290657..291031 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| C2H94_RS01720 (C2H94_01705) | comGF | 291032..291415 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| C2H94_RS01725 (C2H94_01710) | comGE | 291441..291788 (-) | 348 | WP_063335293.1 | ComG operon protein 5 | Machinery gene |
| C2H94_RS01730 (C2H94_01715) | comGD | 291772..292203 (-) | 432 | WP_032726159.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| C2H94_RS01735 (C2H94_01720) | comGC | 292193..292489 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| C2H94_RS01740 (C2H94_01725) | comGB | 292503..293540 (-) | 1038 | WP_103803302.1 | comG operon protein ComGB | Machinery gene |
| C2H94_RS01745 (C2H94_01730) | comGA | 293527..294597 (-) | 1071 | WP_070547533.1 | competence protein ComGA | Machinery gene |
| C2H94_RS01750 (C2H94_01735) | - | 294808..295005 (-) | 198 | WP_103803301.1 | hypothetical protein | - |
| C2H94_RS01755 (C2H94_01740) | corA | 295007..295960 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| C2H94_RS01760 (C2H94_01745) | yqhB | 296103..297431 (+) | 1329 | WP_021480026.1 | hemolysin family protein | - |
| C2H94_RS01765 (C2H94_01750) | rsbRD | 297484..298320 (-) | 837 | WP_021480027.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39778.21 Da Isoelectric Point: 9.6026
>NTDB_id=265435 C2H94_RS01740 WP_103803302.1 292503..293540(-) (comGB) [Bacillus subtilis strain PK5_52]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPIFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKYQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPIFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKYQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=265435 C2H94_RS01740 WP_103803302.1 292503..293540(-) (comGB) [Bacillus subtilis strain PK5_52]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGATTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTC
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGTTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAATATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGCCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCTGCAATGATCCTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGATTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTC
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGTTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAATATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGCCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCTGCAATGATCCTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
98.142 |
93.623 |
0.919 |