Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   BS11774_RS18625 Genome accession   NZ_CP026010
Coordinates   3492435..3492731 (-) Length   98 a.a.
NCBI ID   WP_128474057.1    Uniprot ID   -
Organism   Bacillus subtilis strain ATCC 11774     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3487435..3497731
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS11774_RS18580 (BS11774_18470) tasA 3487842..3488627 (-) 786 WP_128474056.1 biofilm matrix protein TasA -
  BS11774_RS18585 (BS11774_18475) sipW 3488691..3489263 (-) 573 WP_072692741.1 signal peptidase I SipW -
  BS11774_RS18590 (BS11774_18480) tapA 3489247..3490008 (-) 762 WP_029726724.1 amyloid fiber anchoring/assembly protein TapA -
  BS11774_RS18595 (BS11774_18485) yqzG 3490280..3490606 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  BS11774_RS18600 (BS11774_18490) spoIITA 3490648..3490827 (-) 180 WP_029726723.1 YqzE family protein -
  BS11774_RS18605 (BS11774_18495) comGG 3490899..3491273 (-) 375 WP_029317914.1 ComG operon protein ComGG Machinery gene
  BS11774_RS18610 (BS11774_18500) comGF 3491274..3491657 (-) 384 WP_029726721.1 ComG operon protein ComGF Machinery gene
  BS11774_RS18615 (BS11774_18505) comGE 3491683..3492030 (-) 348 WP_088272394.1 ComG operon protein 5 Machinery gene
  BS11774_RS18620 (BS11774_18510) comGD 3492014..3492445 (-) 432 WP_029726720.1 comG operon protein ComGD Machinery gene
  BS11774_RS18625 (BS11774_18515) comGC 3492435..3492731 (-) 297 WP_128474057.1 comG operon protein ComGC Machinery gene
  BS11774_RS18630 (BS11774_18520) comGB 3492745..3493782 (-) 1038 WP_128474058.1 comG operon protein ComGB Machinery gene
  BS11774_RS18635 (BS11774_18525) comGA 3493769..3494839 (-) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  BS11774_RS18640 (BS11774_18530) - 3495052..3495249 (-) 198 WP_029726717.1 hypothetical protein -
  BS11774_RS18645 (BS11774_18535) corA 3495251..3496204 (-) 954 WP_004399136.1 magnesium transporter CorA -
  BS11774_RS18650 (BS11774_18540) yqhB 3496347..3497675 (+) 1329 WP_128474059.1 hemolysin family protein -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10816.65 Da        Isoelectric Point: 6.7075

>NTDB_id=265008 BS11774_RS18625 WP_128474057.1 3492435..3492731(-) (comGC) [Bacillus subtilis strain ATCC 11774]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNLVKAQMTAFELDHEGQTPSLANLQSEGYVKNDAV
CPNGKRIIITGGEVKVEH

Nucleotide


Download         Length: 297 bp        

>NTDB_id=265008 BS11774_RS18625 WP_128474057.1 3492435..3492731(-) (comGC) [Bacillus subtilis strain ATCC 11774]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAACCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACCTGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCAATTTACAGTCAGAGGGCTATGTGAAAAACGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

96.939

100

0.969
  comYC Streptococcus suis isolate S10

48

76.531

0.367
  comGC Staphylococcus aureus MW2

39.13

93.878

0.367
  comGC Staphylococcus aureus N315

39.13

93.878

0.367

Multiple sequence alignment