Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGE   Type   Machinery gene
Locus tag   BS11774_RS18615 Genome accession   NZ_CP026010
Coordinates   3491683..3492030 (-) Length   115 a.a.
NCBI ID   WP_088272394.1    Uniprot ID   -
Organism   Bacillus subtilis strain ATCC 11774     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3486683..3497030
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS11774_RS18570 (BS11774_18460) sinI 3487206..3487379 (+) 174 WP_003230187.1 anti-repressor SinI Regulator
  BS11774_RS18575 (BS11774_18465) sinR 3487413..3487769 (+) 357 WP_128474275.1 transcriptional regulator SinR Regulator
  BS11774_RS18580 (BS11774_18470) tasA 3487842..3488627 (-) 786 WP_128474056.1 biofilm matrix protein TasA -
  BS11774_RS18585 (BS11774_18475) sipW 3488691..3489263 (-) 573 WP_072692741.1 signal peptidase I SipW -
  BS11774_RS18590 (BS11774_18480) tapA 3489247..3490008 (-) 762 WP_029726724.1 amyloid fiber anchoring/assembly protein TapA -
  BS11774_RS18595 (BS11774_18485) yqzG 3490280..3490606 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  BS11774_RS18600 (BS11774_18490) spoIITA 3490648..3490827 (-) 180 WP_029726723.1 YqzE family protein -
  BS11774_RS18605 (BS11774_18495) comGG 3490899..3491273 (-) 375 WP_029317914.1 ComG operon protein ComGG Machinery gene
  BS11774_RS18610 (BS11774_18500) comGF 3491274..3491657 (-) 384 WP_029726721.1 ComG operon protein ComGF Machinery gene
  BS11774_RS18615 (BS11774_18505) comGE 3491683..3492030 (-) 348 WP_088272394.1 ComG operon protein 5 Machinery gene
  BS11774_RS18620 (BS11774_18510) comGD 3492014..3492445 (-) 432 WP_029726720.1 comG operon protein ComGD Machinery gene
  BS11774_RS18625 (BS11774_18515) comGC 3492435..3492731 (-) 297 WP_128474057.1 comG operon protein ComGC Machinery gene
  BS11774_RS18630 (BS11774_18520) comGB 3492745..3493782 (-) 1038 WP_128474058.1 comG operon protein ComGB Machinery gene
  BS11774_RS18635 (BS11774_18525) comGA 3493769..3494839 (-) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  BS11774_RS18640 (BS11774_18530) - 3495052..3495249 (-) 198 WP_029726717.1 hypothetical protein -
  BS11774_RS18645 (BS11774_18535) corA 3495251..3496204 (-) 954 WP_004399136.1 magnesium transporter CorA -

Sequence

Protein


Download         Length: 115 a.a.        Molecular weight: 13295.33 Da        Isoelectric Point: 4.8952

>NTDB_id=265006 BS11774_RS18615 WP_088272394.1 3491683..3492030(-) (comGE) [Bacillus subtilis strain ATCC 11774]
MWRENKGFSTIETMSALSLWLFVLLTVVPLWDKLIADEKMAESREIGYQMMNESISKYVMSGEGAASKTITKNNHIYAMK
WEEEGEYQNVCIKAAAYKEKSYCLSILQTEWLYAS

Nucleotide


Download         Length: 348 bp        

>NTDB_id=265006 BS11774_RS18615 WP_088272394.1 3491683..3492030(-) (comGE) [Bacillus subtilis strain ATCC 11774]
ATGTGGAGAGAAAATAAAGGTTTTTCTACAATAGAAACAATGTCTGCGCTAAGCCTGTGGCTGTTTGTGCTGCTGACAGT
CGTCCCCTTGTGGGACAAGCTGATAGCTGATGAAAAAATGGCGGAATCACGAGAAATCGGCTATCAGATGATGAATGAGA
GCATTAGCAAATATGTCATGAGTGGTGAAGGAGCCGCGTCAAAAACAATTACAAAGAACAATCATATCTATGCAATGAAG
TGGGAGGAGGAGGGCGAATATCAAAACGTATGTATCAAAGCCGCAGCTTATAAAGAGAAATCATATTGCCTCAGCATCCT
GCAGACAGAATGGCTATACGCTTCTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGE Bacillus subtilis subsp. subtilis str. 168

97.391

100

0.974

Multiple sequence alignment