Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   DV155_RS03740 Genome accession   NZ_CP031326
Coordinates   636556..636837 (-) Length   93 a.a.
NCBI ID   WP_002244020.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M21374     
Function   processing and transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 631556..641837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV155_RS03705 - 631858..632496 (-) 639 WP_002219714.1 7-carboxy-7-deazaguanine synthase QueE -
  DV155_RS03710 - 632493..632864 (-) 372 WP_002217868.1 DUF1304 domain-containing protein -
  DV155_RS03715 queD 633133..633555 (-) 423 WP_002217869.1 6-carboxytetrahydropterin synthase QueD -
  DV155_RS03720 - 633562..634077 (-) 516 WP_002217871.1 DUF1543 domain-containing protein -
  DV155_RS03725 queC 634105..634764 (-) 660 WP_002217873.1 7-cyano-7-deazaguanine synthase QueC -
  DV155_RS13690 - 634869..635294 (+) 426 WP_002221417.1 hypothetical protein -
  DV155_RS03735 - 635309..636535 (+) 1227 WP_002217875.1 YihY family inner membrane protein -
  DV155_RS03740 comA 636556..636837 (-) 282 WP_002244020.1 ATP-binding cassette domain-containing protein Regulator
  DV155_RS03745 - 636916..637050 (-) 135 Protein_629 IS1595 family transposase -
  DV155_RS03750 - 637049..637507 (-) 459 WP_002222917.1 hypothetical protein -
  DV155_RS13355 - 638071..638274 (-) 204 WP_033908561.1 hypothetical protein -
  DV155_RS03765 - 639023..639961 (-) 939 WP_002248686.1 immunity 49 family protein -
  DV155_RS13695 - 639964..640584 (-) 621 WP_002222920.1 hypothetical protein -
  DV155_RS13915 - 640819..640905 (-) 87 Protein_634 VENN motif pre-toxin domain-containing protein -
  DV155_RS03775 - 641136..641408 (-) 273 WP_002214440.1 hypothetical protein -

Sequence

Protein


Download         Length: 93 a.a.        Molecular weight: 10128.76 Da        Isoelectric Point: 6.2166

>NTDB_id=264249 DV155_RS03740 WP_002244020.1 636556..636837(-) (comA) [Neisseria meningitidis strain M21374]
MIHEEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKILFLDEATSHLDIANEKAVNANLNGLSIIKIMAAHRK
ETVESADRKMSLG

Nucleotide


Download         Length: 282 bp        

>NTDB_id=264249 DV155_RS03740 WP_002244020.1 636556..636837(-) (comA) [Neisseria meningitidis strain M21374]
ATGATTCACGAAGAAATCTCCGCCATGCCTATGGGCTATGAAACCTTAATCGGCGATATGGGCAGCGCACTGTCAGGCGG
ACAAAAACAACGCATCGTATTGGCGCGGGCCTTATATTGCGAACCGAAAATCCTATTTTTAGATGAAGCGACCAGCCATT
TGGATATTGCCAATGAAAAAGCAGTCAATGCAAACTTGAATGGCTTGTCTATCATAAAAATTATGGCGGCACACAGAAAG
GAAACGGTGGAATCAGCAGATAGGAAAATGTCTTTAGGATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(14-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Streptococcus mitis SK321

46.154

97.849

0.452
  comA Streptococcus mitis NCTC 12261

45.055

97.849

0.441
  comA Streptococcus pneumoniae Rx1

45.055

97.849

0.441
  comA Streptococcus pneumoniae D39

45.055

97.849

0.441
  comA Streptococcus pneumoniae TIGR4

45.055

97.849

0.441
  comA Streptococcus pneumoniae R6

45.055

97.849

0.441
  comA/nlmT Streptococcus mutans UA159

47.126

93.548

0.441
  comA Streptococcus gordonii str. Challis substr. CH1

43.956

97.849

0.43