Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Regulator
Locus tag   DRA65_RS02660 Genome accession   NZ_CP030826
Coordinates   517324..517938 (+) Length   204 a.a.
NCBI ID   WP_196083683.1    Uniprot ID   -
Organism   Neisseria meningitidis strain 11-251     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 512324..522938
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DRA65_RS02635 (DRA65_03025) - 512416..512748 (+) 333 WP_002226445.1 hypothetical protein -
  DRA65_RS02640 (DRA65_03030) - 513080..513589 (+) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -
  DRA65_RS02645 (DRA65_03040) - 514161..514748 (-) 588 WP_002248497.1 superoxide dismutase -
  DRA65_RS02650 (DRA65_03050) dnaB 514911..516317 (+) 1407 WP_002248498.1 replicative DNA helicase -
  DRA65_RS02655 (DRA65_03055) pilH 516626..517294 (+) 669 WP_002249139.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  DRA65_RS02660 (DRA65_03060) pilV 517324..517938 (+) 615 WP_196083683.1 type IV pilus modification protein PilV Regulator
  DRA65_RS02665 (DRA65_03065) pilJ 517935..518900 (+) 966 WP_196083679.1 PilW family protein Machinery gene
  DRA65_RS02670 (DRA65_03070) pilK 518879..519478 (+) 600 WP_002248501.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  DRA65_RS02675 (DRA65_03075) pilX 519483..519956 (+) 474 WP_196083684.1 PilX family type IV pilin Machinery gene
  DRA65_RS02680 (DRA65_03100) - 522063..522491 (-) 429 Protein_514 AzlC family ABC transporter permease -

Sequence

Protein


Download         Length: 204 a.a.        Molecular weight: 22215.23 Da        Isoelectric Point: 5.6951

>NTDB_id=260882 DRA65_RS02660 WP_196083683.1 517324..517938(+) (pilV) [Neisseria meningitidis strain 11-251]
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNHHTLSVVDGDFQVGVIKTKTQLAEVQLKRFSYELKNALPDAAAIHYAVCKDSSGAAPTLSDSGAFSRNCDDKA
NGDTLIKVLWVNDSAGDSDIARTNLEANGNNIVYTYQARVGGRE

Nucleotide


Download         Length: 615 bp        

>NTDB_id=260882 DRA65_RS02660 WP_196083683.1 517324..517938(+) (pilV) [Neisseria meningitidis strain 11-251]
ATGAAGAATAATGATTGCTTCCGCCTGAAAAACCCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCACTATTGTCTGTTCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCAGAGACGCAAACCA
TCGTCAGTCAAATCACGCAAAACCTGATGGAGGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACCATCATACACTATCAGTTGTGGATGGCGATTTTCAGGTTGGTGTCATAAAAACTAAGAC
GCAGTTGGCAGAGGTACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCATCCATTACG
CCGTCTGCAAGGATTCGTCGGGTGCTGCGCCGACATTGTCCGACAGCGGTGCTTTTTCTCGAAATTGCGATGATAAGGCA
AACGGGGATACTTTAATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTGCCCGTACGAATCTTGAGGC
GAACGGCAACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

89.855

100

0.912
  pilV/pilI Neisseria gonorrhoeae MS11

82.353

100

0.824