Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | CXP32_RS12670 | Genome accession | NZ_CP025256 |
| Coordinates | 510848..511435 (-) | Length | 195 a.a. |
| NCBI ID | WP_000205166.1 | Uniprot ID | Q9ETN5 |
| Organism | Streptococcus pneumoniae strain Xen35 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 505848..516435
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXP32_RS02645 (CXP32_02645) | - | 506310..507650 (+) | 1341 | WP_001017646.1 | sensor histidine kinase | - |
| CXP32_RS02650 (CXP32_02650) | blpC | 507721..507849 (-) | 129 | WP_000358815.1 | quorum-sensing system pheromone BlpC | - |
| CXP32_RS02655 (CXP32_02655) | - | 507906..509267 (-) | 1362 | WP_001069075.1 | bacteriocin secretion accessory protein | - |
| CXP32_RS12660 (CXP32_02660) | comA/nlmT | 509278..509925 (-) | 648 | WP_078064020.1 | ATP-binding cassette domain-containing protein | Regulator |
| CXP32_RS12665 (CXP32_02665) | comA/nlmT | 509941..510954 (-) | 1014 | WP_307772067.1 | ABC transporter transmembrane domain-containing protein | Regulator |
| CXP32_RS12670 (CXP32_02670) | comA/nlmT | 510848..511435 (-) | 588 | WP_000205166.1 | cysteine peptidase family C39 domain-containing protein | Regulator |
| CXP32_RS02675 (CXP32_02675) | blpI | 511717..511914 (+) | 198 | WP_001093259.1 | bacteriocin-like peptide BlpI | - |
| CXP32_RS02685 (CXP32_02685) | blpJ | 512381..512650 (+) | 270 | WP_001093248.1 | bacteriocin-like peptide BlpJ | - |
| CXP32_RS02690 (CXP32_02690) | blpU | 512719..512949 (+) | 231 | WP_000379967.1 | bacteriocin-like peptide BlpU | - |
| CXP32_RS02695 (CXP32_02695) | - | 512952..513071 (+) | 120 | WP_000346296.1 | PncF family bacteriocin immunity protein | - |
| CXP32_RS11970 (CXP32_02700) | - | 513368..513532 (+) | 165 | WP_000727118.1 | hypothetical protein | - |
| CXP32_RS02705 (CXP32_02705) | - | 513529..513933 (+) | 405 | WP_000846943.1 | hypothetical protein | - |
| CXP32_RS02710 (CXP32_02710) | - | 514136..514940 (+) | 805 | WP_100214365.1 | IS5 family transposase | - |
| CXP32_RS02715 (CXP32_02715) | blpM | 515090..515344 (+) | 255 | WP_000379879.1 | two-peptide bacteriocin subunit BlpM | - |
| CXP32_RS02720 (CXP32_02720) | blpN | 515360..515563 (+) | 204 | WP_001099492.1 | two-peptide bacteriocin subunit BlpN | - |
| CXP32_RS02730 (CXP32_02730) | cipB | 515807..515956 (+) | 150 | WP_001818346.1 | bacteriocin-like peptide BlpO | Regulator |
| CXP32_RS02735 (CXP32_02735) | - | 516060..516179 (+) | 120 | WP_000346296.1 | PncF family bacteriocin immunity protein | - |
Sequence
Protein
Download Length: 195 a.a. Molecular weight: 22270.71 Da Isoelectric Point: 9.6188
>NTDB_id=259514 CXP32_RS12670 WP_000205166.1 510848..511435(-) (comA/nlmT) [Streptococcus pneumoniae strain Xen35]
MTSYKRTFVPQIDARDCGVAALASIAKFYGSDFSLAHLRELAKTNKEGTTALGIVKAADEMGFETRPVQADKTLFDMSDV
PYPFIVHVNKEGKLQHYYVVYQTKKDYLIIGDPDPSVKITKMSKERFFYEWTGVAIFLATKPSYQPHKDKKNGLLSKLPS
SDFQTKISHCLHCSLKLIGHYYQYRWFLLSPRNLG
MTSYKRTFVPQIDARDCGVAALASIAKFYGSDFSLAHLRELAKTNKEGTTALGIVKAADEMGFETRPVQADKTLFDMSDV
PYPFIVHVNKEGKLQHYYVVYQTKKDYLIIGDPDPSVKITKMSKERFFYEWTGVAIFLATKPSYQPHKDKKNGLLSKLPS
SDFQTKISHCLHCSLKLIGHYYQYRWFLLSPRNLG
Nucleotide
Download Length: 588 bp
>NTDB_id=259514 CXP32_RS12670 WP_000205166.1 510848..511435(-) (comA/nlmT) [Streptococcus pneumoniae strain Xen35]
ATGACTTCTTATAAACGTACATTTGTTCCTCAAATAGATGCGAGAGACTGTGGTGTCGCTGCCTTAGCCTCGATTGCTAA
ATTCTATGGTTCAGATTTTTCTCTAGCTCACTTGAGAGAACTTGCAAAGACCAATAAAGAAGGGACGACTGCTCTTGGCA
TTGTAAAAGCCGCTGATGAAATGGGCTTTGAAACAAGACCTGTTCAAGCAGATAAAACGCTCTTTGACATGAGTGATGTC
CCCTATCCATTTATCGTTCACGTTAACAAAGAAGGAAAACTCCAACATTACTATGTTGTCTATCAAACAAAGAAAGACTA
TCTGATTATTGGTGATCCTGACCCTTCTGTAAAAATCACTAAAATGTCAAAAGAACGCTTTTTCTATGAATGGACTGGAG
TAGCTATTTTTCTAGCTACCAAACCCAGCTATCAACCCCATAAAGATAAAAAGAATGGTCTACTAAGCAAGCTTCCTTCC
TCTGATTTTCAAACAAAAATCTCTCATTGCTTACATTGTTCTCTCAAGCTTATTGGTCACTATTATCAATATAGGTGGTT
CTTACTATCTCCAAGGAATCTTGGATGA
ATGACTTCTTATAAACGTACATTTGTTCCTCAAATAGATGCGAGAGACTGTGGTGTCGCTGCCTTAGCCTCGATTGCTAA
ATTCTATGGTTCAGATTTTTCTCTAGCTCACTTGAGAGAACTTGCAAAGACCAATAAAGAAGGGACGACTGCTCTTGGCA
TTGTAAAAGCCGCTGATGAAATGGGCTTTGAAACAAGACCTGTTCAAGCAGATAAAACGCTCTTTGACATGAGTGATGTC
CCCTATCCATTTATCGTTCACGTTAACAAAGAAGGAAAACTCCAACATTACTATGTTGTCTATCAAACAAAGAAAGACTA
TCTGATTATTGGTGATCCTGACCCTTCTGTAAAAATCACTAAAATGTCAAAAGAACGCTTTTTCTATGAATGGACTGGAG
TAGCTATTTTTCTAGCTACCAAACCCAGCTATCAACCCCATAAAGATAAAAAGAATGGTCTACTAAGCAAGCTTCCTTCC
TCTGATTTTCAAACAAAAATCTCTCATTGCTTACATTGTTCTCTCAAGCTTATTGGTCACTATTATCAATATAGGTGGTT
CTTACTATCTCCAAGGAATCTTGGATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
59.89 |
93.333 |
0.559 |
| comA | Streptococcus mitis NCTC 12261 |
54.891 |
94.359 |
0.518 |
| comA | Streptococcus mitis SK321 |
54.348 |
94.359 |
0.513 |
| comA | Streptococcus pneumoniae TIGR4 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus pneumoniae Rx1 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus pneumoniae D39 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus pneumoniae R6 |
53.804 |
94.359 |
0.508 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
52.717 |
94.359 |
0.497 |