Detailed information NTG0253466

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: A388_RS01890
• Genome accession: NZ_CP024418
• Coordinates: 365214..366272 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain A388
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 360214..371272

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A388_RS01875 (A388_00347)	-	361320..361652 (+)	333	WP_000169598.1	hypothetical protein	-
A388_RS01880 (A388_00348)	-	361655..362479 (+)	825	WP_001990541.1	putative RNA methyltransferase	-
A388_RS01885 (A388_00349)	ponA	362497..365052 (-)	2556	WP_000736662.1	penicillin-binding protein PBP1a	-
A388_RS01890 (A388_00350)	pilM	365214..366272 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
A388_RS01895 (A388_00351)	pilN	366272..366913 (+)	642	WP_000201229.1	PilN domain-containing protein	Machinery gene
A388_RS01900 (A388_00352)	pilO	366910..367650 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
A388_RS01905 (A388_00353)	pilP	367661..368188 (+)	528	WP_000695059.1	pilus assembly protein PilP	Machinery gene
A388_RS01910 (A388_00354)	pilQ	368251..370416 (+)	2166	WP_001017040.1	type IV pilus secretin PilQ family protein	Machinery gene
A388_RS01915 (A388_00355)	aroK	370428..370997 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=253466 A388_RS01890 WP_002014066.1 365214..366272(+) (pilM) [Acinetobacter baumannii strain A388]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=253466 A388_RS01890 WP_002014066.1 365214..366272(+) (pilM) [Acinetobacter baumannii strain A388]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423