Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | A388_RS01895 | Genome accession | NZ_CP024418 |
| Coordinates | 366272..366913 (+) | Length | 213 a.a. |
| NCBI ID | WP_000201229.1 | Uniprot ID | A0A0J0ZM99 |
| Organism | Acinetobacter baumannii strain A388 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 361272..371913
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A388_RS01875 (A388_00347) | - | 361320..361652 (+) | 333 | WP_000169598.1 | hypothetical protein | - |
| A388_RS01880 (A388_00348) | - | 361655..362479 (+) | 825 | WP_001990541.1 | putative RNA methyltransferase | - |
| A388_RS01885 (A388_00349) | ponA | 362497..365052 (-) | 2556 | WP_000736662.1 | penicillin-binding protein PBP1a | - |
| A388_RS01890 (A388_00350) | pilM | 365214..366272 (+) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
| A388_RS01895 (A388_00351) | pilN | 366272..366913 (+) | 642 | WP_000201229.1 | PilN domain-containing protein | Machinery gene |
| A388_RS01900 (A388_00352) | pilO | 366910..367650 (+) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| A388_RS01905 (A388_00353) | pilP | 367661..368188 (+) | 528 | WP_000695059.1 | pilus assembly protein PilP | Machinery gene |
| A388_RS01910 (A388_00354) | pilQ | 368251..370416 (+) | 2166 | WP_001017040.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| A388_RS01915 (A388_00355) | aroK | 370428..370997 (+) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 24063.40 Da Isoelectric Point: 5.3968
>NTDB_id=253467 A388_RS01895 WP_000201229.1 366272..366913(+) (pilN) [Acinetobacter baumannii strain A388]
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKSASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGVAK
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKSASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGVAK
Nucleotide
Download Length: 642 bp
>NTDB_id=253467 A388_RS01895 WP_000201229.1 366272..366913(+) (pilN) [Acinetobacter baumannii strain A388]
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTCATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTAGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCATCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAAAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGTCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGCGAAAGTGTGGGGGTCGCTAAAT
GA
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTCATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTAGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCATCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAAAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGTCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGCGAAAGTGTGGGGGTCGCTAAAT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
99.061 |
100 |
0.991 |
| comN | Acinetobacter baylyi ADP1 |
72.038 |
99.061 |
0.714 |