Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | FORC73_RS05040 | Genome accession | NZ_CP024082 |
| Coordinates | 1041895..1042206 (+) | Length | 103 a.a. |
| NCBI ID | WP_001166105.1 | Uniprot ID | Q9KQT1 |
| Organism | Vibrio cholerae strain FORC_073 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1036895..1047206
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC73_RS05025 (FORC73_0923) | lon | 1036932..1039292 (+) | 2361 | WP_032470897.1 | endopeptidase La | - |
| FORC73_RS05030 (FORC73_0924) | - | 1039476..1039748 (+) | 273 | WP_001044516.1 | HU family DNA-binding protein | - |
| FORC73_RS05035 (FORC73_0925) | ppiD | 1039901..1041760 (+) | 1860 | WP_032470896.1 | peptidylprolyl isomerase | - |
| FORC73_RS05040 (FORC73_0926) | comEA | 1041895..1042206 (+) | 312 | WP_001166105.1 | ComEA family DNA-binding protein | Machinery gene |
| FORC73_RS05045 (FORC73_0927) | cmk | 1042389..1043066 (+) | 678 | WP_119783106.1 | (d)CMP kinase | - |
| FORC73_RS05050 (FORC73_0928) | rpsA | 1043175..1044845 (+) | 1671 | WP_000140318.1 | 30S ribosomal protein S1 | - |
| FORC73_RS05055 (FORC73_0929) | ihfB | 1045134..1045412 (+) | 279 | WP_000167341.1 | integration host factor subunit beta | - |
| FORC73_RS05060 (FORC73_0930) | - | 1045551..1045832 (+) | 282 | WP_000691492.1 | LapA family protein | - |
| FORC73_RS05065 (FORC73_0931) | lapB | 1045844..1047013 (+) | 1170 | WP_000889971.1 | lipopolysaccharide assembly protein LapB | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 10966.78 Da Isoelectric Point: 5.0506
>NTDB_id=251728 FORC73_RS05040 WP_001166105.1 1041895..1042206(+) (comEA) [Vibrio cholerae strain FORC_073]
MQIKTKIVTLFLSLCLPTLPLLANAEETAPAAQVEEGIVITVNINTASAEELATLLKGIGLKKAQAIVDYREANGPFTHI
DDLTNVKGIGEATVRNNAARILL
MQIKTKIVTLFLSLCLPTLPLLANAEETAPAAQVEEGIVITVNINTASAEELATLLKGIGLKKAQAIVDYREANGPFTHI
DDLTNVKGIGEATVRNNAARILL
Nucleotide
Download Length: 312 bp
>NTDB_id=251728 FORC73_RS05040 WP_001166105.1 1041895..1042206(+) (comEA) [Vibrio cholerae strain FORC_073]
ATGCAAATCAAAACCAAAATAGTGACACTGTTTCTTTCTCTTTGCCTACCGACATTACCGTTACTGGCCAATGCCGAGGA
AACGGCACCCGCTGCGCAGGTAGAAGAAGGTATTGTGATCACTGTCAACATTAATACCGCTTCTGCAGAAGAACTGGCGA
CGTTACTCAAAGGCATCGGGCTTAAAAAAGCTCAGGCCATTGTCGATTATCGAGAAGCCAACGGTCCTTTTACTCATATC
GATGATCTGACGAATGTGAAAGGGATTGGTGAAGCGACAGTGCGCAACAATGCCGCAAGGATCTTGTTATAA
ATGCAAATCAAAACCAAAATAGTGACACTGTTTCTTTCTCTTTGCCTACCGACATTACCGTTACTGGCCAATGCCGAGGA
AACGGCACCCGCTGCGCAGGTAGAAGAAGGTATTGTGATCACTGTCAACATTAATACCGCTTCTGCAGAAGAACTGGCGA
CGTTACTCAAAGGCATCGGGCTTAAAAAAGCTCAGGCCATTGTCGATTATCGAGAAGCCAACGGTCCTTTTACTCATATC
GATGATCTGACGAATGTGAAAGGGATTGGTGAAGCGACAGTGCGCAACAATGCCGCAAGGATCTTGTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
100 |
100 |
1 |
| comEA | Vibrio cholerae strain A1552 |
100 |
100 |
1 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
62.766 |
91.262 |
0.573 |
| comEA | Vibrio campbellii strain DS40M4 |
58.333 |
93.204 |
0.544 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
40.541 |
100 |
0.437 |