Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | SAB_RS07570 | Genome accession | NC_007622 |
| Coordinates | 1535378..1536352 (-) | Length | 324 a.a. |
| NCBI ID | WP_000697229.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus RF122 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1530378..1541352
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAB_RS07530 (SAB1409c) | gcvT | 1530879..1531970 (-) | 1092 | WP_000093341.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SAB_RS07535 (SAB1410c) | - | 1532129..1532653 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| SAB_RS07540 | - | 1532643..1532789 (-) | 147 | WP_078062659.1 | hypothetical protein | - |
| SAB_RS07545 (SAB1411c) | comGF | 1532886..1533383 (-) | 498 | WP_052658450.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SAB_RS07550 (SAB1412c) | comGE | 1533301..1533600 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| SAB_RS07555 (SAB1413c) | comGD | 1533587..1534033 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SAB_RS07560 (SAB1414c) | comGC | 1534011..1534322 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SAB_RS07565 (SAB1415c) | comGB | 1534336..1535406 (-) | 1071 | Protein_1470 | competence type IV pilus assembly protein ComGB | - |
| SAB_RS07570 (SAB1416c) | comGA | 1535378..1536352 (-) | 975 | WP_000697229.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SAB_RS07575 (SAB1417c) | - | 1536404..1537027 (-) | 624 | WP_001223007.1 | MBL fold metallo-hydrolase | - |
| SAB_RS07580 (SAB1418c) | - | 1537024..1537353 (-) | 330 | WP_001018873.1 | MTH1187 family thiamine-binding protein | - |
| SAB_RS07585 (SAB1419c) | - | 1537353..1538339 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| SAB_RS07590 (SAB1420c) | - | 1538336..1538539 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
| SAB_RS07595 (SAB1421c) | - | 1538520..1539983 (-) | 1464 | WP_001017855.1 | rhomboid family protein | - |
| SAB_RS07600 (SAB1422c) | - | 1539995..1540534 (-) | 540 | WP_000164549.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| SAB_RS07605 (SAB1423c) | rpmG | 1540743..1540892 (-) | 150 | WP_001265709.1 | 50S ribosomal protein L33 | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36873.98 Da Isoelectric Point: 8.8508
>NTDB_id=25153 SAB_RS07570 WP_000697229.1 1535378..1536352(-) (comGA) [Staphylococcus aureus RF122]
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYLF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFKNLEDKLDDMTKAGVICETTM
DKYI
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQAGLDVSTQQVAQSGRYSYLF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFKNLEDKLDDMTKAGVICETTM
DKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=25153 SAB_RS07570 WP_000697229.1 1535378..1536352(-) (comGA) [Staphylococcus aureus RF122]
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAGTTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAGAGCGGTCGATATAGTTACCTTTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTTATCAGAATTGTACCTCA
ATTTTTTCAACAACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGGCCAACTGGTTCAGGAAAAAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAGGATCCTGTAGAGATGCAAATTCCTGGTATCGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAAGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAAGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGTATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATAATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAGTTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAGAGCGGTCGATATAGTTACCTTTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTTATCAGAATTGTACCTCA
ATTTTTTCAACAACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGGCCAACTGGTTCAGGAAAAAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAGGATCCTGTAGAGATGCAAATTCCTGGTATCGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAAGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAAGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGTATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATAATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
99.691 |
100 |
0.997 |
| comGA | Staphylococcus aureus N315 |
99.691 |
100 |
0.997 |