Detailed information NTG0251152

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: BS636_RS12490
• Genome accession: NZ_CP024011
• Coordinates: 2568397..2569575 (+)
• Length: 392 a.a.
• NCBI ID: WP_099339061.1
• Uniprot ID: -
• Organism: Acinetobacter sp. LoGeW2-3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2563397..2574575

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BS636_RS12475 (BS636_12470)	-	2564733..2565845 (+)	1113	WP_099339058.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-
BS636_RS12480 (BS636_12475)	-	2566052..2566582 (+)	531	WP_099339059.1	glycine zipper domain-containing protein	-
BS636_RS12485 (BS636_12480)	-	2567104..2568153 (+)	1050	WP_099339060.1	3-deoxy-7-phosphoheptulonate synthase	-
BS636_RS12490 (BS636_12485)	pilU	2568397..2569575 (+)	1179	WP_099339061.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
BS636_RS12495 (BS636_12490)	pilU	2569965..2571167 (+)	1203	WP_099339062.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
BS636_RS12500 (BS636_12495)	-	2571230..2572408 (-)	1179	WP_099339063.1	MFS transporter	-
BS636_RS12505 (BS636_12500)	gcvH	2572639..2573013 (-)	375	WP_099339064.1	glycine cleavage system protein GcvH	-
BS636_RS12510 (BS636_12505)	-	2573086..2574114 (-)	1029	WP_099339065.1	AraC family transcriptional regulator	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 44340.80 Da
• Isoelectric Point: 6.4198

>NTDB_id=251152 BS636_RS12490 WP_099339061.1 2568397..2569575(+) (pilU) [Acinetobacter sp. LoGeW2-3]
MYTPELLDEARKFMHHMLTKVVEYGGSDLFITADFPPSIKQQGLMKPFGQQKLAADKTRLFAYALMNDRQIKEFESVMDC
NFGISVPGVSRFRVNVFQQQHNVGMVIRTITTDIPSFQQLGLPNSLQQVVMEKRGLVLIVGATGVGKSTTLAAMIDHRNT
YSEGHIVTIEDPVEYVYQHKKSMITQREIGVDCISWHNALINTMRQAPDVIVIGEIRDTDSMEQAIAFAESGHLCLATLH
SNNADQALDRIINFFPEERRNQLLLDLSANMKAVISQRLIRTEDGQGRRAAVEILLNTPLVSDFIRKGDFYELKTIMARS
RELGMQTFDQALFDLYNQGIISYDEALRNADSSNEMRLQIKLKSSRINPALQEEGSKMTILEQSKETTLSRS

Nucleotide

• Length: 1179 bp

>NTDB_id=251152 BS636_RS12490 WP_099339061.1 2568397..2569575(+) (pilU) [Acinetobacter sp. LoGeW2-3]
ATGTATACACCCGAATTGCTCGATGAAGCACGTAAATTTATGCACCATATGCTGACCAAAGTGGTTGAATATGGCGGCTC
AGATCTTTTTATTACTGCTGATTTTCCGCCGAGTATCAAACAGCAGGGTTTGATGAAGCCTTTTGGTCAGCAGAAACTGG
CGGCAGATAAAACCCGCCTGTTTGCCTATGCCTTGATGAATGATCGGCAGATCAAAGAATTTGAATCAGTCATGGATTGC
AATTTTGGGATCAGTGTACCGGGTGTATCTCGTTTCAGGGTGAATGTCTTTCAGCAACAGCATAACGTTGGCATGGTGAT
CAGGACCATTACTACGGATATTCCAAGTTTTCAGCAATTAGGGCTACCGAATTCGCTGCAACAGGTCGTTATGGAAAAAC
GCGGACTAGTGTTGATCGTGGGCGCAACAGGTGTGGGTAAATCGACTACGCTGGCAGCCATGATTGATCATCGGAATACT
TACTCAGAAGGACATATCGTTACCATAGAAGATCCGGTGGAATATGTTTATCAGCATAAAAAGTCCATGATTACCCAACG
TGAAATTGGTGTAGATTGCATCTCTTGGCATAATGCCCTGATCAATACCATGCGTCAGGCTCCGGATGTCATCGTGATTG
GTGAAATTCGGGATACTGACAGTATGGAGCAGGCAATTGCCTTTGCGGAATCCGGTCACTTGTGTTTGGCCACCTTGCAT
TCTAATAATGCTGATCAGGCTCTGGATCGTATTATCAACTTCTTTCCGGAAGAGCGCCGCAATCAGCTGTTATTGGATTT
ATCTGCCAATATGAAAGCTGTGATTTCTCAACGTCTGATTCGTACCGAGGATGGTCAAGGTCGCCGTGCGGCTGTAGAAA
TTCTGCTGAATACGCCGTTGGTCTCAGACTTTATCCGTAAAGGAGATTTTTACGAGCTGAAAACCATTATGGCGCGCTCG
CGTGAACTGGGCATGCAGACCTTTGATCAGGCACTTTTTGATCTATATAACCAGGGTATTATTTCTTATGACGAAGCCTT
GCGTAATGCAGATTCGAGTAATGAAATGCGTTTGCAAATTAAATTAAAAAGCAGTCGCATCAATCCGGCTCTTCAGGAAG
AAGGCAGCAAGATGACGATACTGGAACAGTCTAAAGAAACGACACTCTCTAGAAGCTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (64-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	56.609	88.776	0.503
pilU	Acinetobacter baylyi ADP1	54.237	90.306	0.49
pilU	Vibrio cholerae strain A1552	49.859	90.561	0.452
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.183	86.48	0.365