Detailed information
Bioinformatically predicted
Overview
| Name | pilX | Type | Machinery gene |
| Locus tag | CQR34_RS05565 | Genome accession | NZ_CP023814 |
| Coordinates | 926591..927064 (+) | Length | 157 a.a. |
| NCBI ID | WP_002247808.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain M26417 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 921591..932064
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CQR34_RS05540 (CQR34_05540) | dnaB | 922049..923455 (+) | 1407 | WP_002213843.1 | replicative DNA helicase | - |
| CQR34_RS05545 (CQR34_05545) | pilH | 923764..924432 (+) | 669 | WP_024465109.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| CQR34_RS05550 (CQR34_05550) | pilV | 924462..925076 (+) | 615 | WP_024465108.1 | type IV pilus modification protein PilV | Machinery gene |
| CQR34_RS05555 (CQR34_05555) | pilJ | 925073..926011 (+) | 939 | WP_002222655.1 | PilW family protein | Machinery gene |
| CQR34_RS05560 (CQR34_05560) | pilK | 925990..926586 (+) | 597 | WP_024465107.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| CQR34_RS05565 (CQR34_05565) | pilX | 926591..927064 (+) | 474 | WP_002247808.1 | PilX family type IV pilin | Machinery gene |
| CQR34_RS05580 (CQR34_05580) | - | 928812..929240 (-) | 429 | Protein_941 | AzlC family ABC transporter permease | - |
| CQR34_RS05585 (CQR34_05585) | dut | 929383..929835 (+) | 453 | WP_002220679.1 | dUTP diphosphatase | - |
| CQR34_RS05590 (CQR34_05590) | dapC | 929911..931098 (+) | 1188 | WP_002220680.1 | succinyldiaminopimelate transaminase | - |
| CQR34_RS15130 | - | 931186..931311 (+) | 126 | Protein_944 | IS5/IS1182 family transposase | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 17402.18 Da Isoelectric Point: 9.7122
>NTDB_id=250244 CQR34_RS05565 WP_002247808.1 926591..927064(+) (pilX) [Neisseria meningitidis strain M26417]
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNTVKQLILKNPLDDNQTIKSKLEIFVSGYKM
NPKIAKKYSVSVRFVDKEKSRAYSLVGVPKAGTGYTLSVWMNSVGDGYKCRDAASARAYSETLSADAGCEAFSNRKK
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNTVKQLILKNPLDDNQTIKSKLEIFVSGYKM
NPKIAKKYSVSVRFVDKEKSRAYSLVGVPKAGTGYTLSVWMNSVGDGYKCRDAASARAYSETLSADAGCEAFSNRKK
Nucleotide
Download Length: 474 bp
>NTDB_id=250244 CQR34_RS05565 WP_002247808.1 926591..927064(+) (pilX) [Neisseria meningitidis strain M26417]
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATCATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATACTGTCAAAC
AGCTTATTTTGAAAAATCCCCTGGACGATAATCAGACCATCAAGAGCAAACTGGAAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCAAAAAATATAGTGTTTCGGTAAGGTTTGTCGATAAGGAAAAATCAAGGGCATACAGCTTGGTCGG
CGTTCCGAAGGCGGGGACGGGTTATACTTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCGAGCCTATTCGGAGACTTTATCCGCAGATGCCGGCTGCGAAGCTTTCTCTAATCGTAAAAAATAG
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATCATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATACTGTCAAAC
AGCTTATTTTGAAAAATCCCCTGGACGATAATCAGACCATCAAGAGCAAACTGGAAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCAAAAAATATAGTGTTTCGGTAAGGTTTGTCGATAAGGAAAAATCAAGGGCATACAGCTTGGTCGG
CGTTCCGAAGGCGGGGACGGGTTATACTTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCGAGCCTATTCGGAGACTTTATCCGCAGATGCCGGCTGCGAAGCTTTCTCTAATCGTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilX | Neisseria meningitidis 8013 |
91.083 |
100 |
0.911 |
| pilL | Neisseria gonorrhoeae MS11 |
89.172 |
100 |
0.892 |