Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CO687_RS03050 Genome accession   NZ_CP023511
Coordinates   638472..639236 (-) Length   254 a.a.
NCBI ID   WP_008808036.1    Uniprot ID   A0AB35FR66
Organism   Streptococcus gordonii strain FDAARGOS_371     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 633472..644236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO687_RS03030 (CO687_03030) - 634884..635402 (+) 519 WP_020992856.1 YehR family protein -
  CO687_RS03035 (CO687_03035) - 635421..635624 (-) 204 WP_008808039.1 DUF951 family protein -
  CO687_RS03040 (CO687_03040) dnaN 635624..636760 (-) 1137 WP_008808038.1 DNA polymerase III subunit beta -
  CO687_RS03045 (CO687_03045) dnaA 636916..638268 (-) 1353 WP_008808037.1 chromosomal replication initiator protein DnaA -
  CO687_RS03050 (CO687_03050) spo0J 638472..639236 (-) 765 WP_008808036.1 ParB/RepB/Spo0J family partition protein Regulator
  CO687_RS03055 (CO687_03055) htrA 639302..640495 (-) 1194 WP_008808035.1 S1C family serine protease Regulator
  CO687_RS03060 (CO687_03060) rlmH 640689..641168 (+) 480 WP_008808034.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CO687_RS03070 (CO687_03070) comC/comC1 641454..641618 (+) 165 WP_080998577.1 bacteriocin Regulator
  CO687_RS03075 (CO687_03075) comD/comD2 641631..642992 (+) 1362 WP_301335837.1 competence system sensor histidine kinase ComD Regulator
  CO687_RS03080 (CO687_03080) comE/comE2 642989..643756 (+) 768 WP_008808031.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 29327.08 Da        Isoelectric Point: 9.6391

>NTDB_id=247940 CO687_RS03050 WP_008808036.1 638472..639236(-) (spo0J) [Streptococcus gordonii strain FDAARGOS_371]
MENYQYILIKDIHTNPYQPRKDFSIEKLNELANSIKENGLIQPIIVRKSSIIGYELLAGERRFRAAKIAGLTEIPALVKS
LSDDEMMKQAIIENLQREDLNPIEEAESYQHLIYKGLTHDEIAQIMGKSRPYITNLVRLLQLPDFVLKAVKEGRISQAHA
RLLIKLKEKDQKKWLEKIISSDISVRKLEKLLQTSTTKPKSENVQKIFIEEEEENLKKLLGVDVKISLSKKQTGKISISF
SNQEEYERIINSLK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=247940 CO687_RS03050 WP_008808036.1 638472..639236(-) (spo0J) [Streptococcus gordonii strain FDAARGOS_371]
ATGGAAAATTATCAATATATTTTAATTAAAGATATTCACACCAACCCCTATCAACCAAGAAAAGATTTTTCAATAGAGAA
ATTAAACGAGTTAGCAAATTCTATTAAAGAAAACGGATTAATTCAGCCTATTATCGTCAGGAAATCATCTATCATTGGAT
ACGAACTTTTAGCTGGGGAAAGAAGATTTAGGGCAGCTAAAATAGCAGGCTTAACTGAAATTCCTGCCTTAGTCAAATCA
CTAAGCGATGATGAAATGATGAAGCAGGCTATTATTGAAAATCTTCAAAGAGAGGATCTCAATCCAATAGAAGAAGCTGA
ATCTTATCAACATCTTATTTACAAGGGGTTAACGCATGATGAAATCGCTCAGATTATGGGGAAATCAAGGCCTTATATTA
CAAATCTTGTTCGCTTGCTACAGTTACCTGATTTTGTCTTAAAAGCTGTAAAAGAAGGTCGTATTTCTCAGGCTCATGCT
CGATTACTAATAAAACTTAAGGAAAAAGACCAGAAAAAATGGCTTGAAAAAATTATTTCTTCAGATATTTCTGTTAGAAA
ATTAGAGAAATTATTACAAACTTCTACTACTAAGCCTAAGTCTGAAAATGTCCAAAAAATTTTTATCGAAGAAGAAGAAG
AAAATCTAAAGAAATTATTGGGAGTTGATGTAAAGATTAGTCTCTCTAAGAAACAAACTGGCAAAATCTCAATTTCTTTT
TCTAATCAGGAAGAATATGAAAGAATTATTAACAGTCTTAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-193)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.331

100

0.543

Multiple sequence alignment