Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   CO687_RS00190 Genome accession   NZ_CP023511
Coordinates   27076..28929 (-) Length   617 a.a.
NCBI ID   WP_096754704.1    Uniprot ID   -
Organism   Streptococcus gordonii strain FDAARGOS_371     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 22076..33929
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO687_RS00150 (CO687_00150) - 22087..22515 (-) 429 Protein_16 sigma-70 family RNA polymerase sigma factor -
  CO687_RS00155 (CO687_00155) - 22657..23070 (-) 414 Protein_17 DNA/RNA helicase -
  CO687_RS00160 (CO687_00160) - 23082..23189 (-) 108 Protein_18 HPF/RaiA family ribosome-associated protein -
  CO687_RS00165 (CO687_00165) - 23326..23664 (+) 339 Protein_19 DUF1949 domain-containing protein -
  CO687_RS00170 (CO687_00170) - 23762..24055 (+) 294 Protein_20 pyridoxal-phosphate dependent enzyme -
  CO687_RS00175 (CO687_00175) - 24993..25205 (-) 213 Protein_21 response regulator transcription factor -
  CO687_RS00180 (CO687_00180) - 25207..26208 (-) 1002 WP_061583693.1 sensor histidine kinase -
  CO687_RS00185 (CO687_00185) liaF 26205..26903 (-) 699 WP_045506061.1 cell wall-active antibiotics response protein LiaF -
  CO687_RS00190 (CO687_00190) stkP 27076..28929 (-) 1854 WP_096754704.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  CO687_RS00195 (CO687_00195) - 28926..29666 (-) 741 WP_045772999.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  CO687_RS00200 (CO687_00200) rsmB 29687..31000 (-) 1314 WP_096754705.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  CO687_RS00205 (CO687_00205) fmt 30990..31925 (-) 936 WP_061596060.1 methionyl-tRNA formyltransferase -

Sequence


Protein


Download         Length: 617 a.a.        Molecular weight: 67149.20 Da        Isoelectric Point: 6.5896

>NTDB_id=247932 CO687_RS00190 WP_096754704.1 27076..28929(-) (stkP) [Streptococcus gordonii strain FDAARGOS_371]
MIQIGKIFAGRYKIIKQIGRGGMADVYLAKDLILDGEEVAVKVLRTNYQTDPIAVARFQREARAMADLDHPHIVRVTDIG
EEDGQQYLAMEYVAGLDLKRYIKEHAPLSNEEAVRIMGQILLAMRLAHARGIVHRDLKPQNVLLTPDGNAKVTDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATFQSDIYAMGIIFYEMLTGHIPYDGDSAVTIALQHFQKPLPSIIAENANVP
QSLENVIIKATAKKLTDRYQSVSDMYVDLSSCLSPERRNEKKLMFDDAVKADTKTLPKIPQVTPPVAFRVNNDPATDVEQ
KVPQVAPPTKPKKKHHLRARYKVLLAAVFLVIAAFLALLYLTPSNKQVPDVTGKTVAEAREAIEKVNLKVGEEIEENSDE
VASGMIIRTDPVAGTQRKEGSTVNLVVSKGAKTLIMEDYTGQTTAQAVERLTDVLKVPKNNIKVEEVETNDAEEGTIFEQ
TPAAGATYDLTSNTKIVLKVAKAVSTIEMPNFGSLQYTYANARNYLISLGIPSSNIERVVDRSVVSSQSDLVTSQSPATG
PVNPKKVKVTLYVTEATTQSSSSSSSSNSNSSSSSKNTSSSSSSEDETSASSSTHGD

Nucleotide


Download         Length: 1854 bp        

>NTDB_id=247932 CO687_RS00190 WP_096754704.1 27076..28929(-) (stkP) [Streptococcus gordonii strain FDAARGOS_371]
ATGATTCAAATCGGCAAAATTTTTGCCGGGCGATATAAAATCATCAAACAAATTGGCCGAGGCGGGATGGCAGATGTCTA
TCTTGCCAAGGATTTGATTTTAGATGGTGAAGAAGTGGCGGTTAAGGTTCTTAGAACCAATTACCAGACGGATCCTATCG
CTGTTGCACGTTTCCAACGAGAAGCGCGTGCCATGGCGGATTTGGACCATCCACATATCGTTCGTGTCACCGATATTGGC
GAAGAAGACGGCCAGCAATATTTGGCTATGGAATATGTAGCTGGCTTGGATCTCAAACGATACATTAAAGAGCACGCTCC
TTTGTCGAACGAGGAAGCCGTTCGAATTATGGGACAAATTCTTTTAGCTATGCGCTTGGCACATGCTCGTGGGATTGTTC
ACCGAGATTTGAAACCGCAAAACGTTCTCCTGACTCCAGATGGAAATGCTAAGGTAACGGACTTTGGGATTGCGGTTGCC
TTTGCAGAAACAAGTTTGACCCAAACAAATTCCATGCTTGGTAGTGTCCATTATTTGTCTCCTGAGCAGGCGCGTGGTTC
GAAAGCAACTTTCCAAAGCGATATCTATGCGATGGGGATCATCTTTTATGAGATGCTGACTGGTCATATTCCTTATGATG
GGGATAGTGCAGTGACAATCGCTCTGCAACATTTCCAAAAACCATTGCCGTCCATTATTGCTGAAAACGCCAATGTTCCG
CAGTCTTTGGAAAATGTTATTATTAAGGCTACTGCTAAAAAGCTGACAGATCGATATCAGAGTGTTTCGGATATGTATGT
AGATCTGTCTAGCTGCCTGTCACCTGAACGACGGAATGAAAAGAAACTGATGTTTGATGACGCGGTAAAAGCGGATACTA
AAACACTTCCGAAGATTCCACAAGTCACACCTCCTGTAGCTTTTAGAGTAAATAATGATCCAGCTACAGATGTTGAACAG
AAAGTCCCTCAAGTTGCACCGCCAACAAAACCTAAGAAAAAGCATCATTTGAGAGCGAGATACAAGGTTTTGTTAGCTGC
AGTATTTCTGGTCATTGCTGCTTTTCTAGCTTTGCTCTATCTAACACCATCTAATAAGCAGGTTCCAGATGTTACTGGCA
AGACAGTTGCTGAAGCTAGAGAAGCGATTGAAAAAGTCAATTTAAAAGTTGGCGAAGAAATAGAAGAGAATAGTGATGAA
GTAGCTTCTGGAATGATTATTCGAACAGATCCAGTGGCAGGGACTCAGAGAAAGGAAGGCAGTACGGTTAATTTAGTTGT
TTCTAAGGGAGCTAAAACGCTGATCATGGAAGACTATACTGGTCAAACTACTGCCCAAGCCGTTGAAAGGCTCACGGATG
TTCTAAAAGTTCCAAAAAACAATATTAAAGTTGAAGAAGTTGAAACAAACGATGCAGAAGAAGGAACAATTTTTGAACAG
ACACCAGCTGCGGGAGCTACCTATGATCTCACTTCAAATACGAAGATTGTTTTAAAAGTAGCCAAAGCAGTATCAACGAT
TGAAATGCCAAACTTTGGTAGCCTTCAATATACTTATGCAAACGCTCGAAATTATCTGATTTCTCTAGGAATTCCATCTA
GCAACATTGAAAGAGTCGTGGATCGTTCAGTTGTGTCGAGTCAATCTGATTTGGTGACATCACAATCTCCAGCAACTGGA
CCAGTTAATCCTAAGAAGGTAAAAGTAACCTTATATGTAACTGAAGCAACTACTCAAAGTTCAAGCTCTAGCTCAAGTTC
GAATTCTAACTCCTCATCAAGTAGCAAGAATACGTCATCGTCAAGTTCTTCAGAGGATGAAACTTCAGCATCAAGTTCGA
CACATGGTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

70.543

83.63

0.59

  stkP Streptococcus pneumoniae D39

70.349

83.63

0.588

  stkP Streptococcus pneumoniae R6

70.349

83.63

0.588

  stkP Streptococcus pneumoniae Rx1

70.155

83.63

0.587

  pknB Streptococcus mutans UA159

57.343

92.707

0.532

  stkP/pknB Streptococcus salivarius strain HSISS4

57.847

88.817

0.514


Multiple sequence alignment