Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CO686_RS09145 Genome accession   NZ_CP023507
Coordinates   1864930..1865688 (+) Length   252 a.a.
NCBI ID   WP_002881154.1    Uniprot ID   A0AAW7W6T9
Organism   Streptococcus oralis strain FDAARGOS_367     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1859930..1870688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO686_RS09115 (CO686_09115) comE 1860515..1861267 (-) 753 WP_000866082.1 competence system response regulator transcription factor ComE Regulator
  CO686_RS09120 (CO686_09120) comD 1861264..1862583 (-) 1320 WP_049550146.1 competence system sensor histidine kinase ComD Regulator
  CO686_RS09125 (CO686_09125) comC/comC2 1862604..1862729 (-) 126 WP_000799678.1 competence-stimulating peptide ComC Regulator
  CO686_RS09135 (CO686_09135) rlmH 1863011..1863490 (-) 480 WP_000694219.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CO686_RS09140 (CO686_09140) htrA 1863676..1864872 (+) 1197 WP_000681804.1 S1C family serine protease Regulator
  CO686_RS09145 (CO686_09145) spo0J 1864930..1865688 (+) 759 WP_002881154.1 ParB/RepB/Spo0J family partition protein Regulator
  CO686_RS09150 (CO686_09150) dnaA 1865906..1867267 (+) 1362 WP_000660630.1 chromosomal replication initiator protein DnaA -
  CO686_RS09155 (CO686_09155) dnaN 1867426..1868562 (+) 1137 WP_096753738.1 DNA polymerase III subunit beta -
  CO686_RS09160 (CO686_09160) - 1868627..1868821 (+) 195 WP_000285184.1 DUF951 family protein -
  CO686_RS09165 (CO686_09165) ychF 1868906..1870021 (+) 1116 WP_096753739.1 redox-regulated ATPase YchF -
  CO686_RS09170 (CO686_09170) pth 1870095..1870664 (+) 570 WP_096753740.1 aminoacyl-tRNA hydrolase -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29066.54 Da        Isoelectric Point: 8.2862

>NTDB_id=247893 CO686_RS09145 WP_002881154.1 1864930..1865688(+) (spo0J) [Streptococcus oralis strain FDAARGOS_367]
MEKFEMISISEIQKNPYQPRKEFDVEKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKH
LSDQEMMIQSIIENLQRENLNPVEEARAYESLVEKGFTHTEIADKMGKSRPYITNFIRLLSLPEYILTEVENGKISQAHA
RSLVGLDKEQQDYFFQLIKNEDISVRKLEALLTDKKHKKQKKSDSFIKDEENQLKKLLGLSVEIKLSKKDTGKIIISFSS
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=247893 CO686_RS09145 WP_002881154.1 1864930..1865688(+) (spo0J) [Streptococcus oralis strain FDAARGOS_367]
ATGGAAAAATTTGAAATGATTTCTATCTCTGAAATACAAAAGAATCCTTACCAACCTCGGAAAGAATTTGATGTAGAAAA
ATTAAAGGAATTGGCTCAGTCAATCAAAGAAAATGGGCTAATCCAACCAATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGATATCGAGCTTCTCTCTTGGCTGGTCTGACCTCTATTCCAGCCGTTGTAAAGCAC
CTCTCAGATCAGGAAATGATGATTCAGTCAATCATTGAGAATTTGCAGAGAGAAAATTTAAATCCTGTTGAAGAAGCACG
CGCCTACGAATCTTTAGTAGAAAAAGGATTTACTCACACTGAGATAGCAGATAAAATGGGGAAATCTCGTCCTTATATCA
CTAATTTTATTCGTTTGCTTTCCCTACCAGAATATATCTTAACTGAAGTAGAAAATGGAAAAATTTCTCAAGCGCATGCA
CGTTCACTTGTTGGTTTGGATAAAGAGCAGCAAGACTATTTCTTCCAACTAATCAAAAATGAAGATATTTCTGTGAGAAA
GTTAGAAGCACTTCTTACAGATAAAAAACACAAGAAGCAAAAAAAAAGTGATTCTTTCATCAAAGACGAAGAAAATCAAT
TAAAAAAACTACTCGGTTTAAGTGTAGAAATTAAACTTTCAAAAAAAGATACTGGAAAGATTATTATCTCCTTTTCAAGT
CAAGAAGAATACGATAGAATTATTAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(145-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment