Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   Aba9201_RS12745 Genome accession   NZ_CP023020
Coordinates   2596435..2597571 (+) Length   378 a.a.
NCBI ID   WP_000957666.1    Uniprot ID   A0A062IFS2
Organism   Acinetobacter baumannii strain 9201     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 2591435..2602571
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Aba9201_RS12720 (Aba9201_12700) - 2591695..2591901 (-) 207 WP_000182542.1 hypothetical protein -
  Aba9201_RS12725 (Aba9201_12705) - 2591955..2594069 (-) 2115 WP_001120681.1 TonB-dependent copper receptor -
  Aba9201_RS12730 (Aba9201_12710) - 2594142..2594570 (-) 429 WP_000231981.1 DUF2946 family protein -
  Aba9201_RS12735 (Aba9201_12715) def 2594607..2595137 (-) 531 WP_001196539.1 peptide deformylase -
  Aba9201_RS12740 (Aba9201_12720) tsaP 2595260..2596414 (+) 1155 WP_000755273.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  Aba9201_RS12745 (Aba9201_12725) dprA 2596435..2597571 (+) 1137 WP_000957666.1 DNA-processing protein DprA Machinery gene
  Aba9201_RS12750 (Aba9201_12730) - 2597616..2598185 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  Aba9201_RS12755 (Aba9201_12735) - 2598577..2599497 (-) 921 WP_118896064.1 DMT family transporter -
  Aba9201_RS12760 (Aba9201_12740) - 2599603..2599761 (-) 159 Protein_2485 TetR/AcrR family transcriptional regulator -
  Aba9201_RS12765 (Aba9201_12745) - 2599755..2599886 (+) 132 Protein_2486 glutathione peroxidase -
  Aba9201_RS12770 (Aba9201_12750) - 2600032..2600631 (+) 600 WP_000757144.1 hypothetical protein -
  Aba9201_RS12775 (Aba9201_12755) - 2600693..2601112 (-) 420 WP_000224542.1 F0F1 ATP synthase subunit epsilon -
  Aba9201_RS12780 (Aba9201_12760) atpD 2601130..2602524 (-) 1395 WP_000094481.1 F0F1 ATP synthase subunit beta -

Sequence


Protein


Download         Length: 378 a.a.        Molecular weight: 42132.72 Da        Isoelectric Point: 6.4547

>NTDB_id=244131 Aba9201_RS12745 WP_000957666.1 2596435..2597571(+) (dprA) [Acinetobacter baumannii strain 9201]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVSEFQTPQGQTQFEQLVQQV
VQHTDFILTPDDSGYPTQLLPYTDYPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRSLY

Nucleotide


Download         Length: 1137 bp        

>NTDB_id=244131 Aba9201_RS12745 WP_000957666.1 2596435..2597571(+) (dprA) [Acinetobacter baumannii strain 9201]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTAGGGCTAC
ATGCTAATCACTTAAAACGTGTAAGCGAGTTTCAAACGCCCCAAGGTCAGACGCAGTTTGAACAACTTGTACAACAAGTT
GTTCAACATACGGATTTTATTTTAACGCCGGATGACTCTGGCTATCCCACTCAATTACTTCCTTATACAGATTATCCACC
TATTATTTTTGGGAAAGGTCAAGCGCAAGCTTTATTGCAACCTCAGATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCTTATTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTGCTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CGCCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGTGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGCCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATTCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCAACCCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAGGCTAATACGAATACTCCAGAAATTCCT
GAGCATCTGATTGACCTTTATCAGTCTTTAGACTGGGTAGGACAAAATATTGACCAGCTTGTAGTTCACCATAATATTCC
AGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTTGTATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A062IFS2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

98.138

99.471

0.976

  dprA Acinetobacter baumannii strain A118

97.872

99.471

0.974

  dprA Acinetobacter baylyi ADP1

70.496

100

0.714

  dprA Vibrio cholerae strain A1552

43.202

87.566

0.378


Multiple sequence alignment