Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   Aba9201_RS12740 Genome accession   NZ_CP023020
Coordinates   2595260..2596414 (+) Length   384 a.a.
NCBI ID   WP_000755273.1    Uniprot ID   A0A062IHI9
Organism   Acinetobacter baumannii strain 9201     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2590260..2601414
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Aba9201_RS12715 (Aba9201_12695) - 2590411..2591625 (+) 1215 WP_001177953.1 oxygenase MpaB family protein -
  Aba9201_RS12720 (Aba9201_12700) - 2591695..2591901 (-) 207 WP_000182542.1 hypothetical protein -
  Aba9201_RS12725 (Aba9201_12705) - 2591955..2594069 (-) 2115 WP_001120681.1 TonB-dependent copper receptor -
  Aba9201_RS12730 (Aba9201_12710) - 2594142..2594570 (-) 429 WP_000231981.1 DUF2946 family protein -
  Aba9201_RS12735 (Aba9201_12715) def 2594607..2595137 (-) 531 WP_001196539.1 peptide deformylase -
  Aba9201_RS12740 (Aba9201_12720) tsaP 2595260..2596414 (+) 1155 WP_000755273.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  Aba9201_RS12745 (Aba9201_12725) dprA 2596435..2597571 (+) 1137 WP_000957666.1 DNA-processing protein DprA Machinery gene
  Aba9201_RS12750 (Aba9201_12730) - 2597616..2598185 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  Aba9201_RS12755 (Aba9201_12735) - 2598577..2599497 (-) 921 WP_118896064.1 DMT family transporter -
  Aba9201_RS12760 (Aba9201_12740) - 2599603..2599761 (-) 159 Protein_2485 TetR/AcrR family transcriptional regulator -
  Aba9201_RS12765 (Aba9201_12745) - 2599755..2599886 (+) 132 Protein_2486 glutathione peroxidase -
  Aba9201_RS12770 (Aba9201_12750) - 2600032..2600631 (+) 600 WP_000757144.1 hypothetical protein -
  Aba9201_RS12775 (Aba9201_12755) - 2600693..2601112 (-) 420 WP_000224542.1 F0F1 ATP synthase subunit epsilon -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42395.36 Da        Isoelectric Point: 8.5848

>NTDB_id=244130 Aba9201_RS12740 WP_000755273.1 2595260..2596414(+) (tsaP) [Acinetobacter baumannii strain 9201]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTHLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVHRGDRVMPEEQATLPTLFYPVDAKQVKDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
IFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=244130 Aba9201_RS12740 WP_000755273.1 2595260..2596414(+) (tsaP) [Acinetobacter baumannii strain 9201]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTAGGTATTATTCGCCGCTACACTGGGCAAACCACTCACT
TACAACCTCAAGTTCGCGTCGAAGCATTAAATAATAGTGTTCCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATATTGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGCTACTACAGGTTGCTTCAGGTGTTGCGGTCTCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACATCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGAAGGATGGTGGCAAGATTATTCGTGTCA
TGGGTTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACCCAGGGCATTCAAGTAGGCCAA
ATTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A062IHI9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

98.958

100

0.99


Multiple sequence alignment