Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | BGM07_RS11810 | Genome accession | NZ_CP022473 |
| Coordinates | 602042..602560 (+) | Length | 172 a.a. |
| NCBI ID | WP_005462534.1 | Uniprot ID | Q87LS4 |
| Organism | Vibrio parahaemolyticus strain MAVP-Q | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 597042..607560
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BGM07_RS11800 (BGM07_011830) | gshA | 599777..601345 (+) | 1569 | WP_015297257.1 | glutamate--cysteine ligase | - |
| BGM07_RS11805 (BGM07_011835) | - | 601370..601975 (+) | 606 | WP_015297256.1 | hypothetical protein | - |
| BGM07_RS11810 (BGM07_011840) | luxS | 602042..602560 (+) | 519 | WP_005462534.1 | S-ribosylhomocysteine lyase | Regulator |
| BGM07_RS11815 (BGM07_011845) | - | 602621..603901 (-) | 1281 | WP_005462557.1 | HlyC/CorC family transporter | - |
| BGM07_RS11820 (BGM07_011850) | - | 604027..604821 (-) | 795 | WP_005462565.1 | inner membrane protein YpjD | - |
| BGM07_RS11825 (BGM07_011855) | ffh | 605034..606416 (+) | 1383 | WP_005462555.1 | signal recognition particle protein | - |
| BGM07_RS11830 (BGM07_011860) | rpsP | 606626..606874 (+) | 249 | WP_005379962.1 | 30S ribosomal protein S16 | - |
| BGM07_RS11835 (BGM07_011865) | rimM | 606903..607451 (+) | 549 | WP_005462552.1 | ribosome maturation factor RimM | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19033.73 Da Isoelectric Point: 4.7134
>NTDB_id=239762 BGM07_RS11810 WP_005462534.1 602042..602560(+) (luxS) [Vibrio parahaemolyticus strain MAVP-Q]
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMEDVLKVESQNKIPELNEYQCGTAAMHSLEEAQQIAKNILAAGVSVNKNDELA
LPESMLKELRVD
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMEDVLKVESQNKIPELNEYQCGTAAMHSLEEAQQIAKNILAAGVSVNKNDELA
LPESMLKELRVD
Nucleotide
Download Length: 519 bp
>NTDB_id=239762 BGM07_RS11810 WP_005462534.1 602042..602560(+) (luxS) [Vibrio parahaemolyticus strain MAVP-Q]
ATGCCTTTACTCGATAGCTTCACCGTAGACCACACTCGCATGAATGCACCAGCAGTGCGTGTCGCGAAAACCATGCAAAC
TCCAAAAGGAGATACCATTACGGTTTTCGACTTACGCTTCACTGCGCCTAACAAAGACATTCTTTCAGAGAAAGGCATTC
ATACACTAGAGCACTTGTACGCAGGTTTCATGCGCAATCACCTAAATGGTGACAGTGTGGAAATCATTGATATCTCACCG
ATGGGATGTCGCACTGGTTTTTACATGAGTCTCATTGGTACGCCTTCTGAACAGCAAGTCGCAGACGCATGGCTTGCTTC
TATGGAAGATGTGCTAAAAGTGGAAAGCCAGAACAAAATCCCTGAGCTAAATGAGTACCAGTGTGGTACTGCAGCGATGC
ATTCTTTAGAAGAAGCACAGCAAATTGCCAAGAACATTCTAGCCGCAGGTGTGTCTGTTAATAAAAACGACGAGTTGGCT
TTGCCAGAATCAATGCTAAAAGAGCTGCGCGTAGACTAA
ATGCCTTTACTCGATAGCTTCACCGTAGACCACACTCGCATGAATGCACCAGCAGTGCGTGTCGCGAAAACCATGCAAAC
TCCAAAAGGAGATACCATTACGGTTTTCGACTTACGCTTCACTGCGCCTAACAAAGACATTCTTTCAGAGAAAGGCATTC
ATACACTAGAGCACTTGTACGCAGGTTTCATGCGCAATCACCTAAATGGTGACAGTGTGGAAATCATTGATATCTCACCG
ATGGGATGTCGCACTGGTTTTTACATGAGTCTCATTGGTACGCCTTCTGAACAGCAAGTCGCAGACGCATGGCTTGCTTC
TATGGAAGATGTGCTAAAAGTGGAAAGCCAGAACAAAATCCCTGAGCTAAATGAGTACCAGTGTGGTACTGCAGCGATGC
ATTCTTTAGAAGAAGCACAGCAAATTGCCAAGAACATTCTAGCCGCAGGTGTGTCTGTTAATAAAAACGACGAGTTGGCT
TTGCCAGAATCAATGCTAAAAGAGCTGCGCGTAGACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
88.889 |
99.419 |
0.884 |