Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   C9J90_RS13735 Genome accession   NZ_CP028189
Coordinates   2668957..2669676 (+) Length   239 a.a.
NCBI ID   WP_001217723.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CFSAN018750     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2663957..2674676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9J90_RS13710 (C9J90_13690) - 2664037..2665017 (+) 981 WP_000427769.1 ABC transporter ATP-binding protein -
  C9J90_RS13715 (C9J90_13695) opp4B 2665010..2665972 (+) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  C9J90_RS13720 (C9J90_13700) opp4C 2665984..2666865 (+) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  C9J90_RS13725 (C9J90_13705) trpS 2666907..2667896 (-) 990 WP_031837887.1 tryptophan--tRNA ligase -
  C9J90_RS13730 (C9J90_13710) spxA 2668191..2668586 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  C9J90_RS13735 (C9J90_13715) mecA 2668957..2669676 (+) 720 WP_001217723.1 adaptor protein MecA Regulator
  C9J90_RS13740 (C9J90_13720) coiA 2669797..2670783 (+) 987 WP_000959292.1 competence protein CoiA Machinery gene
  C9J90_RS13745 (C9J90_13725) pepF 2670831..2672639 (+) 1809 WP_000082725.1 oligoendopeptidase F Regulator
  C9J90_RS13750 (C9J90_13730) yjbH 2673099..2673905 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  C9J90_RS13755 (C9J90_13735) - 2673928..2674293 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -

Sequence

Protein


Download         Length: 239 a.a.        Molecular weight: 28285.17 Da        Isoelectric Point: 4.1548

>NTDB_id=239206 C9J90_RS13735 WP_001217723.1 2668957..2669676(+) (mecA) [Staphylococcus aureus strain CFSAN018750]
MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPLWIQVHAFEKGVEVTISKSKN
EDMMNMSDDDATDQFDEQVQELLAQTLEGEDQLEELFDQRTKEKEAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHS
NPITTEFEDLLYMVDGTYYYAVHFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYAKIIMSHNVTAQVRRYFPETTE

Nucleotide


Download         Length: 720 bp        

>NTDB_id=239206 C9J90_RS13735 WP_001217723.1 2668957..2669676(+) (mecA) [Staphylococcus aureus strain CFSAN018750]
ATGAGAATAGAACGAGTAGATGATACAACTGTAAAATTGTTTATAACATATAGCGATATCGAGGCCCGTGGATTTAGTCG
TGAAGATTTATGGACAAATCGCAAACGTGGCGAAGAATTCTTTTGGTCAATGATGGATGAAATTAACGAAGAAGAAGATT
TTGTTGTAGAAGGTCCATTATGGATTCAAGTACATGCCTTTGAAAAAGGTGTCGAAGTCACAATTTCTAAATCTAAAAAT
GAAGATATGATGAATATGTCTGATGATGATGCAACTGATCAATTTGATGAACAAGTTCAAGAATTGTTAGCTCAAACATT
AGAAGGTGAAGATCAATTAGAAGAATTATTCGATCAACGAACAAAAGAAAAAGAAGCTCAAGGTTCTAAACGTCAAAAGT
CTTCAGCACGTAAAAATACAAGAACAATTATTGTGAAATTTAACGATTTAGAAGATGTTATTAATTATGCATATCATAGC
AATCCAATAACTACAGAGTTTGAAGATTTGTTATATATGGTTGATGGTACTTATTATTATGCTGTACATTTTGATAGTCA
TGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATT
TAAATGACTATGCTAAAATAATTATGAGTCATAACGTAACAGCTCAAGTTCGACGTTATTTTCCAGAGACAACTGAATAA

Domains

Predicted by InterProScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-229)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

37.975

99.163

0.377

Multiple sequence alignment