Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | C7M53_RS10320 | Genome accession | NZ_CP027789 |
| Coordinates | 1975179..1975550 (+) | Length | 123 a.a. |
| NCBI ID | WP_016885441.1 | Uniprot ID | - |
| Organism | Bacillus licheniformis strain TAB7 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1970179..1980550
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M53_RS10290 (C7M53_10280) | - | 1970607..1970840 (+) | 234 | WP_003182231.1 | DUF896 domain-containing protein | - |
| C7M53_RS10295 (C7M53_10285) | recP/tkt | 1971007..1973010 (+) | 2004 | WP_009328229.1 | transketolase | Machinery gene |
| C7M53_RS10300 (C7M53_10290) | sirA | 1973165..1973602 (+) | 438 | WP_003182234.1 | sporulation inhibitor of replication protein SirA | - |
| C7M53_RS10305 (C7M53_10295) | - | 1973687..1973905 (+) | 219 | WP_003182236.1 | YneF family protein | - |
| C7M53_RS10310 (C7M53_10300) | - | 1973986..1974147 (-) | 162 | WP_229107189.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| C7M53_RS10315 (C7M53_10305) | - | 1974390..1975097 (+) | 708 | WP_003182240.1 | cytochrome c biogenesis protein CcdA | - |
| C7M53_RS10320 (C7M53_10310) | pilH | 1975179..1975550 (+) | 372 | WP_016885441.1 | response regulator | Machinery gene |
| C7M53_RS10325 (C7M53_10315) | - | 1975624..1976118 (+) | 495 | WP_085959522.1 | CcdC family protein | - |
| C7M53_RS10330 (C7M53_10320) | - | 1976154..1976582 (-) | 429 | WP_003182245.1 | DUF2621 domain-containing protein | - |
| C7M53_RS10335 (C7M53_10325) | - | 1976787..1977194 (-) | 408 | WP_003182248.1 | Hsp20/alpha crystallin family protein | - |
| C7M53_RS10340 (C7M53_10330) | - | 1977330..1977476 (-) | 147 | WP_003182250.1 | small acid-soluble spore protein P | - |
| C7M53_RS10345 (C7M53_10335) | sspO | 1977518..1977664 (-) | 147 | WP_003182252.1 | small acid-soluble spore protein O | - |
Sequence
Protein
Download Length: 123 a.a. Molecular weight: 13951.47 Da Isoelectric Point: 4.6948
>NTDB_id=237398 C7M53_RS10320 WP_016885441.1 1975179..1975550(+) (pilH) [Bacillus licheniformis strain TAB7]
MTRVLIVDDAKFMRDKIREILETEDLQVAGEAENGEEAVLLYQELQPDLVIMDITMPVKNGIEALKDMIQLNPKVKVIMC
TAMRQKRIVVEVIEAGAKDFIVKPFEETKVVEAIRHVLGNACR
MTRVLIVDDAKFMRDKIREILETEDLQVAGEAENGEEAVLLYQELQPDLVIMDITMPVKNGIEALKDMIQLNPKVKVIMC
TAMRQKRIVVEVIEAGAKDFIVKPFEETKVVEAIRHVLGNACR
Nucleotide
Download Length: 372 bp
>NTDB_id=237398 C7M53_RS10320 WP_016885441.1 1975179..1975550(+) (pilH) [Bacillus licheniformis strain TAB7]
ATGACAAGGGTTTTAATTGTTGATGATGCAAAATTTATGAGAGATAAAATTAGAGAAATACTTGAAACAGAAGACTTGCA
AGTCGCGGGTGAAGCCGAGAACGGGGAAGAAGCTGTTTTGCTTTATCAAGAGCTGCAGCCGGACTTGGTTATCATGGATA
TTACGATGCCTGTGAAAAACGGGATAGAAGCTTTAAAGGATATGATCCAGCTGAACCCGAAAGTGAAAGTGATCATGTGT
ACGGCCATGCGGCAAAAGCGGATCGTCGTTGAGGTGATCGAAGCCGGAGCCAAGGACTTCATCGTCAAGCCTTTCGAGGA
AACGAAAGTCGTCGAAGCGATTCGGCATGTGCTCGGAAATGCTTGCAGATGA
ATGACAAGGGTTTTAATTGTTGATGATGCAAAATTTATGAGAGATAAAATTAGAGAAATACTTGAAACAGAAGACTTGCA
AGTCGCGGGTGAAGCCGAGAACGGGGAAGAAGCTGTTTTGCTTTATCAAGAGCTGCAGCCGGACTTGGTTATCATGGATA
TTACGATGCCTGTGAAAAACGGGATAGAAGCTTTAAAGGATATGATCCAGCTGAACCCGAAAGTGAAAGTGATCATGTGT
ACGGCCATGCGGCAAAAGCGGATCGTCGTTGAGGTGATCGAAGCCGGAGCCAAGGACTTCATCGTCAAGCCTTTCGAGGA
AACGAAAGTCGTCGAAGCGATTCGGCATGTGCTCGGAAATGCTTGCAGATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.585 |
100 |
0.366 |