Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | CEG15_RS11875 | Genome accession | NZ_CP022099 |
| Coordinates | 2591642..2592235 (-) | Length | 197 a.a. |
| NCBI ID | WP_013855887.1 | Uniprot ID | A0A233HKC5 |
| Organism | Vibrio anguillarum strain S3 4/9 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2586642..2597235
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEG15_RS11855 (CEG15_11855) | aroB | 2587574..2588662 (-) | 1089 | WP_026027426.1 | 3-dehydroquinate synthase | - |
| CEG15_RS11860 (CEG15_11860) | aroK | 2588687..2589208 (-) | 522 | WP_010317691.1 | shikimate kinase AroK | - |
| CEG15_RS11865 (CEG15_11865) | pilQ | 2589395..2591080 (-) | 1686 | WP_412767344.1 | type IV pilus secretin PilQ | Machinery gene |
| CEG15_RS11870 (CEG15_11870) | pilP | 2591134..2591655 (-) | 522 | WP_017047272.1 | pilus assembly protein PilP | Machinery gene |
| CEG15_RS11875 (CEG15_11875) | pilO | 2591642..2592235 (-) | 594 | WP_013855887.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CEG15_RS11880 (CEG15_11880) | pilN | 2592228..2592830 (-) | 603 | WP_064625964.1 | PilN domain-containing protein | Machinery gene |
| CEG15_RS11885 (CEG15_11885) | pilM | 2592820..2593830 (-) | 1011 | WP_088729180.1 | type IV pilus assembly protein PilM | Machinery gene |
| CEG15_RS11890 (CEG15_11890) | - | 2593980..2596478 (+) | 2499 | WP_088729181.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 23039.37 Da Isoelectric Point: 4.3879
>NTDB_id=236741 CEG15_RS11875 WP_013855887.1 2591642..2592235(-) (pilO) [Vibrio anguillarum strain S3 4/9]
MTSFQDLDMDEMAEWPLLPQLLVILVLMLIIQGVGAWFYLMPQNEQLQNLKQQEEVLKSTLRIKASKAATLPQLQAQLDE
LTERYDFLLRQLPVQKELASMLASVNELGLDNALTFTRIDWGEKQNKEFLYRLPLNIELTGNYHDIGDFSEAIAKLPRII
NFDDVDWQRVSQESSTLHFRVRAYTYQFKQEVDDEKQ
MTSFQDLDMDEMAEWPLLPQLLVILVLMLIIQGVGAWFYLMPQNEQLQNLKQQEEVLKSTLRIKASKAATLPQLQAQLDE
LTERYDFLLRQLPVQKELASMLASVNELGLDNALTFTRIDWGEKQNKEFLYRLPLNIELTGNYHDIGDFSEAIAKLPRII
NFDDVDWQRVSQESSTLHFRVRAYTYQFKQEVDDEKQ
Nucleotide
Download Length: 594 bp
>NTDB_id=236741 CEG15_RS11875 WP_013855887.1 2591642..2592235(-) (pilO) [Vibrio anguillarum strain S3 4/9]
ATGACTAGTTTTCAAGATCTTGATATGGATGAAATGGCTGAATGGCCGTTGCTGCCTCAATTGCTGGTTATTTTGGTGTT
GATGCTAATTATTCAAGGCGTTGGCGCGTGGTTCTATCTTATGCCTCAAAATGAGCAATTGCAGAACTTAAAACAGCAAG
AAGAGGTGCTGAAATCGACCTTACGGATTAAGGCCAGCAAAGCCGCCACCTTACCCCAGTTGCAAGCTCAACTGGATGAA
TTAACTGAACGTTATGATTTTTTATTACGCCAATTACCCGTGCAAAAAGAGCTCGCAAGCATGCTGGCGTCGGTCAATGA
ACTAGGGCTAGATAACGCGTTAACCTTTACACGTATTGATTGGGGAGAAAAACAGAATAAAGAGTTTCTGTATCGTTTGC
CGCTTAATATCGAATTAACTGGTAATTACCACGACATTGGTGATTTCTCAGAGGCGATCGCGAAATTGCCCCGCATTATT
AATTTCGATGATGTTGATTGGCAACGGGTTAGCCAGGAAAGCAGCACGTTGCATTTTAGGGTGCGCGCTTATACCTATCA
ATTCAAGCAAGAGGTGGACGATGAAAAACAATAA
ATGACTAGTTTTCAAGATCTTGATATGGATGAAATGGCTGAATGGCCGTTGCTGCCTCAATTGCTGGTTATTTTGGTGTT
GATGCTAATTATTCAAGGCGTTGGCGCGTGGTTCTATCTTATGCCTCAAAATGAGCAATTGCAGAACTTAAAACAGCAAG
AAGAGGTGCTGAAATCGACCTTACGGATTAAGGCCAGCAAAGCCGCCACCTTACCCCAGTTGCAAGCTCAACTGGATGAA
TTAACTGAACGTTATGATTTTTTATTACGCCAATTACCCGTGCAAAAAGAGCTCGCAAGCATGCTGGCGTCGGTCAATGA
ACTAGGGCTAGATAACGCGTTAACCTTTACACGTATTGATTGGGGAGAAAAACAGAATAAAGAGTTTCTGTATCGTTTGC
CGCTTAATATCGAATTAACTGGTAATTACCACGACATTGGTGATTTCTCAGAGGCGATCGCGAAATTGCCCCGCATTATT
AATTTCGATGATGTTGATTGGCAACGGGTTAGCCAGGAAAGCAGCACGTTGCATTTTAGGGTGCGCGCTTATACCTATCA
ATTCAAGCAAGAGGTGGACGATGAAAAACAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio cholerae strain A1552 |
80.612 |
99.492 |
0.802 |
| pilO | Vibrio campbellii strain DS40M4 |
70.37 |
95.939 |
0.675 |