Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | CEG15_RS11880 | Genome accession | NZ_CP022099 |
| Coordinates | 2592228..2592830 (-) | Length | 200 a.a. |
| NCBI ID | WP_064625964.1 | Uniprot ID | A0A233HKZ5 |
| Organism | Vibrio anguillarum strain S3 4/9 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2587228..2597830
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEG15_RS11855 (CEG15_11855) | aroB | 2587574..2588662 (-) | 1089 | WP_026027426.1 | 3-dehydroquinate synthase | - |
| CEG15_RS11860 (CEG15_11860) | aroK | 2588687..2589208 (-) | 522 | WP_010317691.1 | shikimate kinase AroK | - |
| CEG15_RS11865 (CEG15_11865) | pilQ | 2589395..2591080 (-) | 1686 | WP_412767344.1 | type IV pilus secretin PilQ | Machinery gene |
| CEG15_RS11870 (CEG15_11870) | pilP | 2591134..2591655 (-) | 522 | WP_017047272.1 | pilus assembly protein PilP | Machinery gene |
| CEG15_RS11875 (CEG15_11875) | pilO | 2591642..2592235 (-) | 594 | WP_013855887.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CEG15_RS11880 (CEG15_11880) | pilN | 2592228..2592830 (-) | 603 | WP_064625964.1 | PilN domain-containing protein | Machinery gene |
| CEG15_RS11885 (CEG15_11885) | pilM | 2592820..2593830 (-) | 1011 | WP_088729180.1 | type IV pilus assembly protein PilM | Machinery gene |
| CEG15_RS11890 (CEG15_11890) | - | 2593980..2596478 (+) | 2499 | WP_088729181.1 | penicillin-binding protein 1A | - |
| CEG15_RS11895 (CEG15_11895) | oxyR | 2596515..2597405 (-) | 891 | WP_026027425.1 | DNA-binding transcriptional regulator OxyR | - |
Sequence
Protein
Download Length: 200 a.a. Molecular weight: 22701.24 Da Isoelectric Point: 9.6928
>NTDB_id=236742 CEG15_RS11880 WP_064625964.1 2592228..2592830(-) (pilN) [Vibrio anguillarum strain S3 4/9]
MLHSINLLPWREEQRAAHKRRFMGLVVLGVMSAVGIQWGIGLYFSGQAQQQESRLAYLNQYIQQLDKQINALKMTEQEHK
ALLTRLSVVESLQSQRNKTTELMNLMPQLMPEGVYVDKIKMNGEEIEITGISDSTARLATMLDNFEKSALLSDVNMHSIV
HGNKRFGKEFQTFKVSFMFHSPTPQGAVLTKIRPTGAVHD
MLHSINLLPWREEQRAAHKRRFMGLVVLGVMSAVGIQWGIGLYFSGQAQQQESRLAYLNQYIQQLDKQINALKMTEQEHK
ALLTRLSVVESLQSQRNKTTELMNLMPQLMPEGVYVDKIKMNGEEIEITGISDSTARLATMLDNFEKSALLSDVNMHSIV
HGNKRFGKEFQTFKVSFMFHSPTPQGAVLTKIRPTGAVHD
Nucleotide
Download Length: 603 bp
>NTDB_id=236742 CEG15_RS11880 WP_064625964.1 2592228..2592830(-) (pilN) [Vibrio anguillarum strain S3 4/9]
ATGTTGCATAGCATTAACTTACTGCCTTGGCGAGAGGAACAAAGAGCGGCGCATAAGCGTCGTTTTATGGGCTTGGTCGT
CTTAGGTGTGATGAGCGCTGTTGGTATTCAATGGGGTATCGGTTTGTATTTCTCTGGGCAAGCACAGCAGCAAGAGTCTC
GTCTGGCCTATTTGAATCAATACATTCAGCAGCTTGATAAACAGATCAATGCATTAAAAATGACGGAACAAGAACACAAG
GCACTATTAACTCGCTTATCGGTTGTTGAGTCATTGCAAAGCCAACGCAATAAAACCACCGAGTTGATGAACCTGATGCC
ACAGCTTATGCCTGAAGGAGTCTACGTCGATAAGATCAAAATGAATGGTGAAGAAATTGAAATTACGGGCATCAGTGACA
GCACTGCGCGTCTTGCGACCATGCTCGATAATTTTGAAAAATCAGCCTTACTTTCCGATGTCAACATGCACTCTATCGTT
CATGGTAATAAGCGATTTGGTAAGGAGTTTCAGACGTTTAAAGTGTCATTTATGTTTCATTCCCCGACACCACAGGGCGC
TGTGCTAACCAAGATTCGGCCTACAGGAGCTGTCCATGACTAG
ATGTTGCATAGCATTAACTTACTGCCTTGGCGAGAGGAACAAAGAGCGGCGCATAAGCGTCGTTTTATGGGCTTGGTCGT
CTTAGGTGTGATGAGCGCTGTTGGTATTCAATGGGGTATCGGTTTGTATTTCTCTGGGCAAGCACAGCAGCAAGAGTCTC
GTCTGGCCTATTTGAATCAATACATTCAGCAGCTTGATAAACAGATCAATGCATTAAAAATGACGGAACAAGAACACAAG
GCACTATTAACTCGCTTATCGGTTGTTGAGTCATTGCAAAGCCAACGCAATAAAACCACCGAGTTGATGAACCTGATGCC
ACAGCTTATGCCTGAAGGAGTCTACGTCGATAAGATCAAAATGAATGGTGAAGAAATTGAAATTACGGGCATCAGTGACA
GCACTGCGCGTCTTGCGACCATGCTCGATAATTTTGAAAAATCAGCCTTACTTTCCGATGTCAACATGCACTCTATCGTT
CATGGTAATAAGCGATTTGGTAAGGAGTTTCAGACGTTTAAAGTGTCATTTATGTTTCATTCCCCGACACCACAGGGCGC
TGTGCTAACCAAGATTCGGCCTACAGGAGCTGTCCATGACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio cholerae strain A1552 |
66.667 |
94.5 |
0.63 |
| pilN | Vibrio campbellii strain DS40M4 |
65.775 |
93.5 |
0.615 |