Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CEG15_RS01560 | Genome accession | NZ_CP022099 |
| Coordinates | 311135..311665 (+) | Length | 176 a.a. |
| NCBI ID | WP_019282036.1 | Uniprot ID | A0A233HL27 |
| Organism | Vibrio anguillarum strain S3 4/9 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 306135..316665
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEG15_RS01545 (CEG15_01545) | uvrA | 306224..309046 (-) | 2823 | WP_088721475.1 | excinuclease ABC subunit UvrA | - |
| CEG15_RS01550 (CEG15_01550) | galU | 309215..310084 (-) | 870 | WP_013857894.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| CEG15_RS01555 (CEG15_01555) | qstR | 310202..310849 (-) | 648 | WP_170895060.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| CEG15_RS01560 (CEG15_01560) | ssb | 311135..311665 (+) | 531 | WP_019282036.1 | single-stranded DNA-binding protein | Machinery gene |
| CEG15_RS01565 (CEG15_01565) | csrD | 311795..313783 (+) | 1989 | WP_088720760.1 | RNase E specificity factor CsrD | - |
| CEG15_RS01570 (CEG15_01570) | - | 313796..315238 (+) | 1443 | WP_088720761.1 | MSHA biogenesis protein MshI | - |
| CEG15_RS01575 (CEG15_01575) | gspM | 315235..315879 (+) | 645 | WP_017047102.1 | type II secretion system protein GspM | - |
| CEG15_RS01580 (CEG15_01580) | - | 315869..316195 (+) | 327 | WP_017050664.1 | MSHA biogenesis protein MshK | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 19331.48 Da Isoelectric Point: 5.2257
>NTDB_id=236711 CEG15_RS01560 WP_019282036.1 311135..311665(+) (ssb) [Vibrio anguillarum strain S3 4/9]
MASRGVNKVILVGNLGNDPEIRYMPGGAAVANITIATSDSWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRAQGGAPAQGGMPQQQQQGGGWGQPQQPAMQKQPQQQSAPQQAQ
PQYNEPPMDFDDDIPF
MASRGVNKVILVGNLGNDPEIRYMPGGAAVANITIATSDSWRDKATGEQREKTEWHRVALFGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRAQGGAPAQGGMPQQQQQGGGWGQPQQPAMQKQPQQQSAPQQAQ
PQYNEPPMDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=236711 CEG15_RS01560 WP_019282036.1 311135..311665(+) (ssb) [Vibrio anguillarum strain S3 4/9]
ATGGCAAGCCGTGGAGTAAATAAAGTTATTTTAGTGGGTAACCTAGGTAACGACCCAGAAATTCGTTATATGCCTGGTGG
CGCTGCTGTGGCAAATATCACCATTGCAACGTCAGATTCATGGCGTGATAAAGCAACTGGCGAGCAACGCGAAAAAACCG
AATGGCACCGTGTTGCGCTGTTTGGCAAATTAGCCGAAGTGGCTGGTGAATACTTACGTAAAGGTTCACAAGTGTACATT
GAAGGTCAGCTACAAACTCGTAAGTGGCAAGATCAAAGCGGACAAGATCGTTATACCACCGAAGTTGTCGTACAAGGTTT
TAATGGTGTGATGCAAATGTTGGGTGGCCGTGCTCAAGGTGGTGCTCCAGCGCAAGGTGGAATGCCACAACAACAGCAAC
AAGGTGGCGGATGGGGGCAACCTCAGCAGCCTGCGATGCAAAAGCAACCACAGCAGCAGTCAGCTCCTCAACAGGCTCAA
CCTCAGTATAATGAACCACCAATGGATTTTGATGACGACATCCCATTCTAA
ATGGCAAGCCGTGGAGTAAATAAAGTTATTTTAGTGGGTAACCTAGGTAACGACCCAGAAATTCGTTATATGCCTGGTGG
CGCTGCTGTGGCAAATATCACCATTGCAACGTCAGATTCATGGCGTGATAAAGCAACTGGCGAGCAACGCGAAAAAACCG
AATGGCACCGTGTTGCGCTGTTTGGCAAATTAGCCGAAGTGGCTGGTGAATACTTACGTAAAGGTTCACAAGTGTACATT
GAAGGTCAGCTACAAACTCGTAAGTGGCAAGATCAAAGCGGACAAGATCGTTATACCACCGAAGTTGTCGTACAAGGTTT
TAATGGTGTGATGCAAATGTTGGGTGGCCGTGCTCAAGGTGGTGCTCCAGCGCAAGGTGGAATGCCACAACAACAGCAAC
AAGGTGGCGGATGGGGGCAACCTCAGCAGCCTGCGATGCAAAAGCAACCACAGCAGCAGTCAGCTCCTCAACAGGCTCAA
CCTCAGTATAATGAACCACCAATGGATTTTGATGACGACATCCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
85.393 |
100 |
0.864 |
| ssb | Glaesserella parasuis strain SC1401 |
54.737 |
100 |
0.591 |
| ssb | Neisseria gonorrhoeae MS11 |
45.556 |
100 |
0.466 |
| ssb | Neisseria meningitidis MC58 |
45 |
100 |
0.46 |