Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CEP69_RS15195 | Genome accession | NZ_CP022049 |
| Coordinates | 3080858..3081385 (+) | Length | 175 a.a. |
| NCBI ID | WP_016155359.1 | Uniprot ID | A0AAE2J7N6 |
| Organism | Citrobacter braakii strain FDAARGOS_290 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3075858..3086385
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEP69_RS15175 (CEP69_15145) | aphA | 3076493..3077206 (+) | 714 | WP_003826615.1 | acid phosphatase AphA | - |
| CEP69_RS15180 (CEP69_15150) | - | 3077333..3077689 (+) | 357 | WP_016155357.1 | MmcQ/YjbR family DNA-binding protein | - |
| CEP69_RS15185 (CEP69_15155) | uvrA | 3077784..3080606 (-) | 2823 | WP_016155358.1 | excinuclease ABC subunit UvrA | - |
| CEP69_RS15195 (CEP69_15165) | ssb | 3080858..3081385 (+) | 528 | WP_016155359.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| CEP69_RS15200 (CEP69_15170) | - | 3081452..3081733 (-) | 282 | WP_016155360.1 | YjcB family protein | - |
| CEP69_RS15205 (CEP69_15175) | - | 3082285..3083871 (+) | 1587 | WP_016155448.1 | EAL domain-containing protein | - |
| CEP69_RS15210 (CEP69_15180) | soxS | 3083874..3084197 (-) | 324 | WP_016155362.1 | superoxide response transcriptional regulator SoxS | - |
| CEP69_RS15215 (CEP69_15185) | soxR | 3084284..3084742 (+) | 459 | WP_016155363.1 | redox-sensitive transcriptional activator SoxR | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 18749.79 Da Isoelectric Point: 5.2456
>NTDB_id=236199 CEP69_RS15195 WP_016155359.1 3080858..3081385(+) (ssb) [Citrobacter braakii strain FDAARGOS_290]
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGVEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPAA
PSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYI
EGQLRTRKWTDQSGVEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPAA
PSNEPPMDFDDDIPF
Nucleotide
Download Length: 528 bp
>NTDB_id=236199 CEP69_RS15195 WP_016155359.1 3080858..3081385(+) (ssb) [Citrobacter braakii strain FDAARGOS_290]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAAATGAAAGAGCAGACTG
AATGGCACCGTGTGGTGCTGTTCGGCAAACTGGCGGAAGTTGCCAGCGAATATCTGCGTAAAGGTTCCCAGGTCTATATC
GAAGGTCAGCTGCGTACCCGCAAATGGACCGATCAATCCGGCGTAGAAAAGTACACCACTGAAGTTGTGGTTAACGTTGG
CGGCACCATGCAAATGCTGGGCGGTCGTCAGGGTGGTGGGGCTCCGGCAGGTGGCGGCCAGCAGCAGGGGGGTTGGGGTC
AGCCTCAGCAGCCGCAAGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGCAGTCGGCTCCGGCAGCG
CCGTCTAATGAGCCGCCGATGGATTTCGACGACGATATTCCGTTCTAA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTATATGCCGAATGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAAATGAAAGAGCAGACTG
AATGGCACCGTGTGGTGCTGTTCGGCAAACTGGCGGAAGTTGCCAGCGAATATCTGCGTAAAGGTTCCCAGGTCTATATC
GAAGGTCAGCTGCGTACCCGCAAATGGACCGATCAATCCGGCGTAGAAAAGTACACCACTGAAGTTGTGGTTAACGTTGG
CGGCACCATGCAAATGCTGGGCGGTCGTCAGGGTGGTGGGGCTCCGGCAGGTGGCGGCCAGCAGCAGGGGGGTTGGGGTC
AGCCTCAGCAGCCGCAAGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGCAGTCGGCTCCGGCAGCG
CCGTCTAATGAGCCGCCGATGGATTTCGACGACGATATTCCGTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
74.586 |
100 |
0.771 |
| ssb | Glaesserella parasuis strain SC1401 |
57.609 |
100 |
0.606 |
| ssb | Neisseria meningitidis MC58 |
48.333 |
100 |
0.497 |
| ssb | Neisseria gonorrhoeae MS11 |
48.333 |
100 |
0.497 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
36.111 |
100 |
0.371 |