Detailed information NTG0235432

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: SE071780_RS05955
• Genome accession: NZ_CP021972
• Coordinates: 1205277..1206122 (-)
• Length: 281 a.a.
• NCBI ID: WP_012679593.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. equi strain ATCC 39506
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1200277..1211122

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SE071780_RS05940 (SE071780_01246)	-	1201548..1202261 (-)	714	WP_012679590.1	DUF3307 domain-containing protein	-
SE071780_RS05945 (SE071780_01247)	-	1202282..1202929 (-)	648	WP_012679591.1	SatD family protein	-
SE071780_RS05950 (SE071780_01248)	topA	1203044..1205176 (-)	2133	WP_012679592.1	type I DNA topoisomerase	-
SE071780_RS05955 (SE071780_01249)	dprA	1205277..1206122 (-)	846	WP_012679593.1	DNA-processing protein DprA	Machinery gene
SE071780_RS05960 (SE071780_01250)	-	1206368..1207150 (-)	783	WP_166525025.1	ribonuclease HII	-
SE071780_RS05965 (SE071780_01251)	ylqF	1207131..1207985 (-)	855	WP_012679595.1	ribosome biogenesis GTPase YlqF	-
SE071780_RS05970 (SE071780_01252)	-	1208578..1209210 (-)	633	Protein_1149	putative bacteriocin export ABC transporter	-
SE071780_RS05975 (SE071780_01253)	-	1209212..1209979 (-)	768	WP_064056097.1	DUF1430 domain-containing protein	-
SE071780_RS05980	-	1210261..1210395 (-)	135	Protein_1151	immunity protein	-

Sequence

Protein

• Length: 281 a.a.
• Molecular weight: 31348.27 Da
• Isoelectric Point: 8.8540

>NTDB_id=235432 SE071780_RS05955 WP_012679593.1 1205277..1206122(-) (dprA) [Streptococcus equi subsp. equi strain ATCC 39506]
MNNFELYKLKKAGLTNLNILNLIDYQQRNNKSLSLRDMAVVSCCKNPVLFIETYKQLNVALLKKEFNQFPSLSILDKQYP
LALREIYNPPVLLFYQGDLSLLEKPKLAVVGSRESSEIGTRSVYKIIKELKNHFVIVSGLARGIDTSAHLACLKAGGQTI
AVIGTGLDRYYPKENHQLQEFLSQRHLVLSEYGAGEAALSYHFPERNRIIAGLSRGVLVVEAKQRSGSLITCQLAMEEGR
DIFVVPDNILNGTSAGCLKLIKDGASCVTHGRDILSEYHYS

Nucleotide

• Length: 846 bp

>NTDB_id=235432 SE071780_RS05955 WP_012679593.1 1205277..1206122(-) (dprA) [Streptococcus equi subsp. equi strain ATCC 39506]
ATGAATAATTTTGAACTTTATAAATTAAAAAAGGCTGGGCTAACTAATTTAAATATTCTTAACCTGATTGACTACCAGCA
GCGTAATAACAAGTCTCTATCCCTTAGAGATATGGCAGTGGTTTCTTGCTGCAAAAATCCAGTTTTATTTATTGAGACCT
ACAAGCAATTAAATGTCGCCTTGTTAAAAAAGGAATTCAACCAGTTTCCGAGCTTATCTATCCTAGATAAGCAATACCCA
TTGGCCCTGAGGGAAATCTATAATCCTCCTGTTTTACTCTTTTATCAAGGTGATTTAAGCCTGTTAGAAAAGCCTAAGCT
GGCAGTCGTTGGCTCTAGAGAATCCAGTGAAATTGGGACGCGGTCTGTTTACAAAATCATCAAAGAGCTTAAGAATCACT
TTGTCATTGTCAGCGGGCTTGCTAGAGGTATTGATACCAGTGCTCATCTCGCTTGCTTGAAAGCAGGTGGGCAAACCATA
GCTGTTATCGGGACTGGCCTAGATCGCTACTATCCAAAGGAAAATCACCAGCTACAGGAGTTTTTATCTCAGCGTCATCT
CGTGCTCAGTGAATATGGGGCTGGAGAGGCCGCCTTGTCTTATCATTTCCCTGAAAGAAACCGTATTATCGCAGGTCTTA
GTCGAGGTGTCCTTGTTGTTGAGGCTAAGCAGCGCTCTGGCTCTTTGATTACCTGTCAGCTAGCTATGGAAGAGGGACGT
GATATTTTTGTCGTACCTGACAATATTCTTAATGGGACATCGGCGGGCTGTTTGAAGCTGATCAAAGATGGTGCCAGCTG
TGTCACTCATGGCAGAGACATTCTTTCAGAATACCACTATTCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-61)

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	68.929	99.644	0.687
dprA/cilB/dalA	Streptococcus mitis SK321	59.286	99.644	0.591
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae D39	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae R6	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	58.571	99.644	0.584
dprA	Lactococcus lactis subsp. cremoris KW2	56.94	100	0.569
dprA	Bacillus subtilis subsp. subtilis str. 168	42.4	88.968	0.377