Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   S101395_RS17990 Genome accession   NZ_CP021920
Coordinates   3408720..3408908 (-) Length   62 a.a.
NCBI ID   WP_006636820.1    Uniprot ID   M5P9H2
Organism   Bacillus sonorensis strain SRCM101395     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3403720..3413908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101395_RS17965 (S101395_03619) - 3404035..3405009 (-) 975 WP_006636825.1 ABC transporter ATP-binding protein -
  S101395_RS17970 (S101395_03620) - 3405188..3405976 (-) 789 WP_088272957.1 DUF2268 domain-containing protein -
  S101395_RS17975 (S101395_03621) fabF 3406057..3407295 (-) 1239 WP_006636823.1 beta-ketoacyl-ACP synthase II -
  S101395_RS17980 (S101395_03622) - 3407317..3408255 (-) 939 WP_006636822.1 beta-ketoacyl-ACP synthase III -
  S101395_RS17985 (S101395_03623) - 3408425..3408676 (+) 252 WP_006636821.1 hypothetical protein -
  S101395_RS17990 (S101395_03624) comZ 3408720..3408908 (-) 189 WP_006636820.1 ComZ family protein Regulator
  S101395_RS17995 (S101395_03625) med 3408898..3409866 (-) 969 WP_006636819.1 BMP family ABC transporter substrate-binding protein Regulator
  S101395_RS18000 (S101395_03626) - 3409952..3410524 (-) 573 WP_006636818.1 hypothetical protein -
  S101395_RS18005 (S101395_03627) - 3410616..3411350 (-) 735 WP_006636817.1 hypothetical protein -
  S101395_RS18010 (S101395_03628) - 3411589..3411774 (+) 186 WP_006636816.1 YjzD family protein -
  S101395_RS18015 (S101395_03629) - 3411854..3412033 (-) 180 WP_006636815.1 YjzC family protein -
  S101395_RS18020 (S101395_03630) argF 3412167..3413117 (-) 951 WP_006636814.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7047.14 Da        Isoelectric Point: 4.2412

>NTDB_id=234908 S101395_RS17990 WP_006636820.1 3408720..3408908(-) (comZ) [Bacillus sonorensis strain SRCM101395]
MQHEKSMEFLQIAMKYVPEAKEEMEKAGIELSPEMLQPFMTLFTKVMAEAYELGKTDAGSDS

Nucleotide


Download         Length: 189 bp        

>NTDB_id=234908 S101395_RS17990 WP_006636820.1 3408720..3408908(-) (comZ) [Bacillus sonorensis strain SRCM101395]
ATGCAGCATGAAAAATCAATGGAATTTTTACAAATCGCCATGAAATACGTGCCGGAAGCAAAGGAAGAAATGGAGAAGGC
GGGAATTGAGCTCTCGCCGGAGATGCTTCAGCCGTTTATGACGCTGTTTACCAAAGTGATGGCGGAAGCGTACGAACTTG
GCAAAACGGATGCTGGATCAGATTCTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M5P9H2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

77.419

100

0.774

Multiple sequence alignment