Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   BB165_RS10570 Genome accession   NZ_CP021870
Coordinates   2050378..2051607 (+) Length   409 a.a.
NCBI ID   WP_000728358.1    Uniprot ID   A0AAW3HT93
Organism   Streptococcus agalactiae strain SG-M4     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2045378..2056607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB165_RS10545 (BB165_10545) - 2046540..2049119 (+) 2580 WP_000154437.1 YfhO family protein -
  BB165_RS10565 (BB165_10565) rlmH 2049698..2050177 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BB165_RS10570 (BB165_10570) htrA 2050378..2051607 (+) 1230 WP_000728358.1 trypsin-like peptidase domain-containing protein Regulator
  BB165_RS10575 (BB165_10575) spo0J 2051705..2052478 (+) 774 WP_000456087.1 ParB/RepB/Spo0J family partition protein Regulator
  BB165_RS10580 (BB165_10580) dnaA 2052677..2054038 (+) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  BB165_RS10585 (BB165_10585) dnaN 2054193..2055329 (+) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  BB165_RS10590 (BB165_10590) - 2055387..2056280 (+) 894 WP_000987441.1 diacylglycerol kinase family protein -
  BB165_RS10595 (BB165_10595) - 2056290..2056487 (+) 198 WP_000285199.1 DUF951 family protein -

Sequence


Protein


Download         Length: 409 a.a.        Molecular weight: 43118.59 Da        Isoelectric Point: 9.5271

>NTDB_id=234302 BB165_RS10570 WP_000728358.1 2050378..2051607(+) (htrA) [Streptococcus agalactiae strain SG-M4]
MKKKLVSSLLKCSLIIIVSFAGGAFASFVMNHNDNIPNGGVTKTSKVNYNNITPTTKAVKKVQNSVVSVINYKQQESRSD
LSDFYSHFFGNQGGNTDKGLQVYGEGSGVIYKKDGKNAYVVTNNHVIDGAKQIEIQLADGSKAVGKLVGSDTYSDLAVVK
IPSDKVSNIAEFADSSKLNIGETAIAIGSPLGTEYANSVTQGIVSSLKRTVTMTNEEGQTVSTNAIQTDAAINPGNSGGA
LINIEGQVIGINSSKISSTSNQTSGQSSGNSVEGMGFAIPSNDVVKIINQLESNGQVERPALGISMAGLSNLPSDVISKL
KIPSNVTNGIVVASIQSGMPAQGKLKKYDVITKVDDKEVVSPSDLQSLLYGHQVGDSITVTFYRGENKQTVTIKLTKTSK
DLAKQRANN

Nucleotide


Download         Length: 1230 bp        

>NTDB_id=234302 BB165_RS10570 WP_000728358.1 2050378..2051607(+) (htrA) [Streptococcus agalactiae strain SG-M4]
GTGAAAAAAAAATTAGTCTCATCACTTCTAAAGTGTTCTCTAATCATTATTGTTAGCTTTGCTGGTGGAGCATTTGCTAG
TTTTGTCATGAATCATAATGACAATATTCCAAATGGTGGTGTCACTAAAACTAGTAAAGTAAATTATAATAACATAACGC
CTACAACAAAAGCTGTTAAAAAGGTACAAAATAGTGTTGTTTCTGTTATCAATTATAAACAACAAGAGAGTCGTTCTGAC
CTATCAGACTTCTATAGTCATTTTTTTGGTAATCAGGGGGGCAACACTGATAAGGGCTTACAAGTTTACGGTGAAGGCTC
TGGAGTCATCTATAAAAAAGATGGTAAAAATGCCTATGTTGTCACTAATAACCACGTCATTGATGGGGCTAAACAAATTG
AAATTCAACTAGCTGATGGCTCAAAAGCAGTTGGGAAACTTGTTGGGTCAGATACCTACTCTGATTTAGCCGTCGTCAAA
ATTCCATCAGATAAGGTTTCAAATATTGCAGAATTTGCTGATTCATCAAAACTCAACATTGGTGAAACTGCTATAGCGAT
CGGAAGCCCTCTTGGAACTGAGTATGCAAATTCTGTAACTCAAGGTATTGTATCTAGTTTAAAAAGAACTGTAACAATGA
CTAATGAAGAAGGACAAACAGTTTCTACAAATGCTATCCAGACTGATGCTGCTATCAATCCTGGTAATTCAGGTGGAGCA
CTTATCAATATTGAAGGACAGGTTATTGGAATTAATTCTAGTAAAATTTCTTCTACATCAAATCAAACCTCAGGACAATC
GTCAGGAAATAGCGTTGAAGGTATGGGATTTGCCATTCCTTCAAATGATGTTGTTAAGATTATCAATCAACTTGAGAGTA
ACGGACAAGTAGAGAGACCTGCTCTAGGTATTTCTATGGCTGGATTAAGTAATTTACCATCCGATGTTATTAGTAAACTG
AAAATCCCAAGTAATGTTACTAATGGTATTGTAGTAGCATCTATCCAATCTGGCATGCCAGCTCAAGGCAAACTAAAGAA
ATACGATGTCATTACTAAAGTTGACGATAAAGAAGTAGTATCTCCAAGTGATTTACAAAGTTTACTCTATGGCCACCAGG
TAGGGGATTCCATAACAGTAACCTTTTATCGTGGTGAAAATAAACAAACAGTCACTATAAAACTTACTAAAACTAGTAAA
GATTTAGCTAAACAACGAGCAAATAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

63.104

96.088

0.606

  htrA Streptococcus gordonii str. Challis substr. CH1

57.357

98.044

0.562

  htrA Streptococcus mitis NCTC 12261

56.281

97.311

0.548

  htrA Streptococcus pneumoniae TIGR4

54.791

99.511

0.545

  htrA Streptococcus pneumoniae Rx1

54.791

99.511

0.545

  htrA Streptococcus pneumoniae D39

54.791

99.511

0.545

  htrA Streptococcus pneumoniae R6

54.791

99.511

0.545


Multiple sequence alignment