Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | O23A_RS22125 | Genome accession | NZ_CP021654 |
| Coordinates | 4796505..4796825 (-) | Length | 106 a.a. |
| NCBI ID | WP_087757252.1 | Uniprot ID | - |
| Organism | Aeromonas salmonicida strain O23A | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4791505..4801825
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O23A_RS22105 (O23A_p4535) | - | 4791789..4792487 (-) | 699 | WP_087757251.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| O23A_RS22110 (O23A_p4536) | - | 4792841..4793812 (+) | 972 | WP_058395950.1 | response regulator | - |
| O23A_RS22115 (O23A_p4537) | - | 4793888..4795285 (-) | 1398 | WP_017412884.1 | peptide MFS transporter | - |
| O23A_RS22120 (O23A_p4538) | galU | 4795499..4796410 (-) | 912 | WP_005318075.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| O23A_RS22125 (O23A_p4539) | comEA | 4796505..4796825 (-) | 321 | WP_087757252.1 | ComEA family DNA-binding protein | Machinery gene |
| O23A_RS22130 (O23A_p4540) | cysQ | 4796992..4797762 (+) | 771 | WP_087757253.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| O23A_RS22135 (O23A_p4541) | - | 4797844..4798140 (-) | 297 | WP_087757254.1 | YciI family protein | - |
| O23A_RS22140 (O23A_p4542) | - | 4798167..4798718 (-) | 552 | WP_005318063.1 | septation protein A | - |
| O23A_RS22145 (O23A_p4543) | - | 4798804..4800339 (-) | 1536 | WP_087757255.1 | pyridoxal-dependent decarboxylase | - |
| O23A_RS22150 (O23A_p4544) | trhA | 4800564..4801199 (+) | 636 | WP_087757256.1 | PAQR family membrane homeostasis protein TrhA | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11254.15 Da Isoelectric Point: 9.6863
>NTDB_id=232311 O23A_RS22125 WP_087757252.1 4796505..4796825(-) (comEA) [Aeromonas salmonicida strain O23A]
MNYKTLTATLLLSCLPLLSQPLLAADKLAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVNGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKLAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVNGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=232311 O23A_RS22125 WP_087757252.1 4796505..4796825(-) (comEA) [Aeromonas salmonicida strain O23A]
ATGAACTACAAGACCCTGACCGCCACACTGCTGCTGAGCTGCCTGCCGCTGTTGAGCCAGCCTTTGCTGGCCGCCGACAA
GCTGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGTAAGGTGAACCTGAATACAGCCAGTATCAATG
AGTTAACAGCTCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCAGATGTCAACGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAGACCCTGACCGCCACACTGCTGCTGAGCTGCCTGCCGCTGTTGAGCCAGCCTTTGCTGGCCGCCGACAA
GCTGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGTAAGGTGAACCTGAATACAGCCAGTATCAATG
AGTTAACAGCTCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCAGATGTCAACGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
51.818 |
100 |
0.538 |
| comEA | Vibrio cholerae strain A1552 |
51.818 |
100 |
0.538 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
61.905 |
59.434 |
0.368 |