Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | CCD83_RS10020 | Genome accession | NZ_CP021521 |
| Coordinates | 1754709..1755209 (-) | Length | 166 a.a. |
| NCBI ID | WP_149385355.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain 09-292 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1749709..1760209
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCD83_RS09995 (CCD83_10185) | gnd | 1750562..1752010 (-) | 1449 | WP_101084543.1 | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | - |
| CCD83_RS13165 | - | 1752090..1752353 (-) | 264 | WP_124215198.1 | hypothetical protein | - |
| CCD83_RS10010 (CCD83_10195) | lpxC | 1752974..1753897 (-) | 924 | WP_101084547.1 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | - |
| CCD83_RS10020 (CCD83_10205) | pilE | 1754709..1755209 (-) | 501 | WP_149385355.1 | pilin | Machinery gene |
| CCD83_RS10030 (CCD83_10215) | - | 1756426..1756860 (-) | 435 | Protein_1702 | pilin | - |
| CCD83_RS10050 (CCD83_10225) | - | 1757752..1758084 (-) | 333 | Protein_1703 | pilin | - |
| CCD83_RS12750 | - | 1758282..1758653 (-) | 372 | Protein_1704 | pilin | - |
| CCD83_RS12755 | - | 1758672..1758977 (-) | 306 | Protein_1705 | pilin | - |
| CCD83_RS13170 | - | 1759188..1759496 (-) | 309 | Protein_1706 | pilin | - |
| CCD83_RS10065 (CCD83_10245) | - | 1759660..1759971 (-) | 312 | Protein_1707 | pilin | - |
Sequence
Protein
Download Length: 166 a.a. Molecular weight: 17570.97 Da Isoelectric Point: 8.4600
>NTDB_id=231750 CCD83_RS10020 WP_149385355.1 1754709..1755209(-) (pilE) [Neisseria meningitidis strain 09-292]
MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGIWPSDNSAAGVASSADIK
GKYVQKVEVNNGVVTATMLSTGVNNEIKGKKLSLWAKRQAGSVKWFCGQPVTRAANAKDDVAAATDNNGINTKHLPSTCR
DDSSAS
MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGIWPSDNSAAGVASSADIK
GKYVQKVEVNNGVVTATMLSTGVNNEIKGKKLSLWAKRQAGSVKWFCGQPVTRAANAKDDVAAATDNNGINTKHLPSTCR
DDSSAS
Nucleotide
Download Length: 501 bp
>NTDB_id=231750 CCD83_RS10020 WP_149385355.1 1754709..1755209(-) (pilE) [Neisseria meningitidis strain 09-292]
ATGAACACCCTTCAAAAAGGTTTTACCCTTATCGAGCTGATGATTGTGATTGCCATCGTCGGCATTTTGGCGGCAGTCGC
CCTTCCTGCTTATCAAGACTACACAGCCCGCGCACAAGTTTCCGAAGCCATTCTTTTGGCTGAAGGTCAAAAATCAGCCG
TCACAGAGTATTACCTGAATCACGGCATATGGCCATCCGACAATAGTGCCGCCGGCGTGGCATCCTCCGCCGACATCAAA
GGCAAATATGTTCAGAAAGTTGAAGTCAACAACGGCGTCGTTACCGCCACAATGCTTTCAACCGGCGTAAACAACGAAAT
CAAAGGCAAAAAACTCTCCCTGTGGGCCAAGCGTCAAGCCGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTACGCGCG
CCGCCAACGCCAAAGACGACGTTGCCGCCGCCACCGACAACAACGGAATCAACACCAAGCACCTGCCGTCAACCTGCCGC
GATGATTCATCTGCCAGCTAA
ATGAACACCCTTCAAAAAGGTTTTACCCTTATCGAGCTGATGATTGTGATTGCCATCGTCGGCATTTTGGCGGCAGTCGC
CCTTCCTGCTTATCAAGACTACACAGCCCGCGCACAAGTTTCCGAAGCCATTCTTTTGGCTGAAGGTCAAAAATCAGCCG
TCACAGAGTATTACCTGAATCACGGCATATGGCCATCCGACAATAGTGCCGCCGGCGTGGCATCCTCCGCCGACATCAAA
GGCAAATATGTTCAGAAAGTTGAAGTCAACAACGGCGTCGTTACCGCCACAATGCTTTCAACCGGCGTAAACAACGAAAT
CAAAGGCAAAAAACTCTCCCTGTGGGCCAAGCGTCAAGCCGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTACGCGCG
CCGCCAACGCCAAAGACGACGTTGCCGCCGCCACCGACAACAACGGAATCAACACCAAGCACCTGCCGTCAACCTGCCGC
GATGATTCATCTGCCAGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae strain FA1090 |
83.735 |
100 |
0.837 |
| pilE | Neisseria gonorrhoeae MS11 |
82.424 |
99.398 |
0.819 |
| pilA/pilA1 | Eikenella corrodens VA1 |
37.356 |
100 |
0.392 |
| comP | Acinetobacter baylyi ADP1 |
37.725 |
100 |
0.38 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
33.158 |
100 |
0.38 |