Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | CCD85_RS10460 | Genome accession | NZ_CP021519 |
| Coordinates | 1858301..1858804 (+) | Length | 167 a.a. |
| NCBI ID | WP_149488398.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain 11-14 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1853301..1863804
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCD85_RS10420 (CCD85_10580) | - | 1853778..1854206 (+) | 429 | Protein_1777 | pilin | - |
| CCD85_RS12995 | - | 1854546..1854907 (+) | 362 | Protein_1778 | pilin | - |
| CCD85_RS10435 (CCD85_10595) | - | 1854819..1855826 (-) | 1008 | WP_149488397.1 | IS5 family transposase | - |
| CCD85_RS13150 (CCD85_10600) | - | 1855890..1856300 (+) | 411 | Protein_1780 | pilin | - |
| CCD85_RS12490 | - | 1856353..1856670 (+) | 318 | Protein_1781 | pilin | - |
| CCD85_RS12495 | - | 1856689..1857060 (+) | 372 | Protein_1782 | pilin | - |
| CCD85_RS10450 (CCD85_10615) | - | 1857258..1857590 (+) | 333 | Protein_1783 | pilin | - |
| CCD85_RS10460 (CCD85_10625) | pilE | 1858301..1858804 (+) | 504 | WP_149488398.1 | pilin | Machinery gene |
| CCD85_RS10470 (CCD85_10635) | lpxC | 1859543..1860466 (+) | 924 | WP_002216134.1 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | - |
| CCD85_RS10485 (CCD85_10645) | gnd | 1861406..1862854 (+) | 1449 | WP_002228813.1 | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 17891.27 Da Isoelectric Point: 7.8412
>NTDB_id=231658 CCD85_RS10460 WP_149488398.1 1858301..1858804(+) (pilE) [Neisseria meningitidis strain 11-14]
MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGEWPSDNSSAGVATSANIK
GKYVQSVEVKNGVVTATMLSSGVNKEIQGKKLSLWAKRQNGSVKWFCGQPVTRDKADKADDGVTAANDKQIDTKHLPSTC
RDDSTAS
MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGEWPSDNSSAGVATSANIK
GKYVQSVEVKNGVVTATMLSSGVNKEIQGKKLSLWAKRQNGSVKWFCGQPVTRDKADKADDGVTAANDKQIDTKHLPSTC
RDDSTAS
Nucleotide
Download Length: 504 bp
>NTDB_id=231658 CCD85_RS10460 WP_149488398.1 1858301..1858804(+) (pilE) [Neisseria meningitidis strain 11-14]
ATGAACACCCTTCAAAAAGGTTTTACCCTTATCGAGCTGATGATTGTGATTGCCATCGTCGGCATTTTGGCGGCAGTCGC
CCTTCCTGCTTATCAAGACTACACAGCCCGCGCACAAGTTTCCGAAGCCATCCTTTTGGCTGAAGGTCAAAAATCAGCCG
TCACAGAGTATTACCTGAATCACGGCGAATGGCCATCCGACAATAGTTCTGCCGGCGTGGCAACCTCCGCCAACATCAAA
GGCAAATATGTTCAAAGCGTTGAAGTCAAAAACGGCGTCGTTACCGCCACAATGCTTTCAAGCGGCGTAAACAAAGAAAT
CCAAGGCAAAAAACTCTCCCTGTGGGCCAAGCGTCAAAACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTACGCGCG
ACAAAGCCGACAAAGCCGACGACGGCGTTACCGCCGCCAACGACAAGCAGATCGACACCAAGCACCTGCCGTCAACCTGC
CGCGATGATTCAACTGCCAGCTAA
ATGAACACCCTTCAAAAAGGTTTTACCCTTATCGAGCTGATGATTGTGATTGCCATCGTCGGCATTTTGGCGGCAGTCGC
CCTTCCTGCTTATCAAGACTACACAGCCCGCGCACAAGTTTCCGAAGCCATCCTTTTGGCTGAAGGTCAAAAATCAGCCG
TCACAGAGTATTACCTGAATCACGGCGAATGGCCATCCGACAATAGTTCTGCCGGCGTGGCAACCTCCGCCAACATCAAA
GGCAAATATGTTCAAAGCGTTGAAGTCAAAAACGGCGTCGTTACCGCCACAATGCTTTCAAGCGGCGTAAACAAAGAAAT
CCAAGGCAAAAAACTCTCCCTGTGGGCCAAGCGTCAAAACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTACGCGCG
ACAAAGCCGACAAAGCCGACGACGGCGTTACCGCCGCCAACGACAAGCAGATCGACACCAAGCACCTGCCGTCAACCTGC
CGCGATGATTCAACTGCCAGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
82.635 |
100 |
0.826 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
82.036 |
100 |
0.82 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.372 |
100 |
0.395 |
| comP | Acinetobacter baylyi ADP1 |
38.69 |
100 |
0.389 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
33.333 |
100 |
0.377 |