Detailed information NTG0231320

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: S101359_RS17720
• Genome accession: NZ_CP021500
• Coordinates: 3571397..3572086 (-)
• Length: 229 a.a.
• NCBI ID: WP_279626854.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain SRCM101359
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3566397..3577086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S101359_RS17685 (S101359_03498)	fliW	3566540..3566971 (-)	432	WP_061570800.1	flagellar assembly protein FliW	-
S101359_RS17690 (S101359_03499)	-	3567006..3567572 (-)	567	WP_003326726.1	DUF6470 family protein	-
S101359_RS17695 (S101359_03500)	flgL	3567620..3568516 (-)	897	WP_088118067.1	flagellar hook-associated protein FlgL	-
S101359_RS17700 (S101359_03501)	flgK	3568528..3570051 (-)	1524	WP_088118068.1	flagellar hook-associated protein FlgK	-
S101359_RS17705 (S101359_03502)	-	3570068..3570550 (-)	483	WP_088118069.1	flagellar protein FlgN	-
S101359_RS17710 (S101359_03503)	flgM	3570566..3570826 (-)	261	WP_003326722.1	flagellar biosynthesis anti-sigma factor FlgM	-
S101359_RS17715 (S101359_03504)	-	3570906..3571325 (-)	420	WP_010790082.1	TIGR03826 family flagellar region protein	-
S101359_RS17720	comFC	3571397..3572086 (-)	690	WP_279626854.1	double zinc ribbon domain-containing protein	Machinery gene
S101359_RS17725 (S101359_03506)	-	3572083..3572379 (-)	297	WP_003326719.1	competence protein ComFB	-
S101359_RS17730 (S101359_03507)	comFA	3572436..3573833 (-)	1398	WP_088118071.1	ATP-dependent helicase ComFA	Machinery gene
S101359_RS17735 (S101359_03508)	-	3573940..3574782 (-)	843	WP_003326716.1	DegV family protein	-
S101359_RS17740 (S101359_03509)	degU	3574889..3575578 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
S101359_RS17745 (S101359_03510)	degS	3575655..3576818 (-)	1164	WP_003326714.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 26337.29 Da
• Isoelectric Point: 8.1700

>NTDB_id=231320 S101359_RS17720 WP_279626854.1 3571397..3572086(-) (comFC) [Bacillus atrophaeus strain SRCM101359]
MNCLLCDSQFSQSLTWRSLFLLEPDEKVCHPCKRQLQRITGTVCPSCGRPQNTNEKCPDCTEWESRIDRGFLLSRNRSVY
LYNEMMKESLARFKFRGDAELLHVFKTDFVSEFSTIYPEKSYVLIPIPLSEERKAERGFNQSELLAKCLGRPIIHSLTRL
DNEKQSKKNKAERLLFKRVFDTEINSVGDMDVILIDDLYTTGATLHHAARCLLEKGKAGSVSSFTLIRS

Nucleotide

• Length: 690 bp

>NTDB_id=231320 S101359_RS17720 WP_279626854.1 3571397..3572086(-) (comFC) [Bacillus atrophaeus strain SRCM101359]
CTGAACTGCTTATTGTGTGATTCGCAGTTTTCTCAATCTCTTACGTGGAGATCTTTATTTTTATTAGAGCCGGACGAAAA
GGTCTGTCATCCGTGCAAAAGACAATTACAAAGGATCACAGGAACGGTTTGCCCTTCATGCGGCAGACCTCAAAACACAA
ATGAAAAATGCCCCGATTGCACCGAATGGGAATCAAGGATTGATAGAGGCTTCCTTTTAAGCCGAAACCGTTCTGTTTAT
TTATATAATGAGATGATGAAAGAATCGCTGGCCCGTTTTAAATTCAGAGGAGACGCAGAGCTTTTGCATGTTTTTAAGAC
TGATTTTGTATCGGAATTTTCAACTATCTATCCTGAAAAAAGCTATGTGCTCATTCCAATCCCGCTGAGTGAGGAACGGA
AAGCAGAGCGCGGGTTTAACCAGTCGGAGCTTCTGGCGAAATGTTTAGGCCGGCCCATCATTCATTCCCTAACCCGTCTG
GATAATGAAAAACAATCCAAGAAAAACAAAGCGGAACGACTCCTTTTCAAACGTGTTTTTGATACTGAAATCAATTCCGT
TGGAGATATGGATGTCATATTAATCGATGATCTTTATACCACTGGCGCTACCTTACACCATGCAGCCCGCTGTTTATTAG
AAAAAGGAAAAGCAGGCTCTGTGTCCTCTTTTACTTTAATCAGAAGCTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (2-60)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	67.401	99.127	0.668
comFC/cflB	Streptococcus pneumoniae TIGR4	37.118	100	0.371
comFC/cflB	Streptococcus pneumoniae Rx1	37.118	100	0.371
comFC/cflB	Streptococcus pneumoniae D39	37.118	100	0.371
comFC/cflB	Streptococcus pneumoniae R6	37.118	100	0.371