Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | CA921_RS04945 | Genome accession | NZ_CP021283 |
| Coordinates | 1072204..1072803 (+) | Length | 199 a.a. |
| NCBI ID | WP_011215096.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pneumophila strain Allentown | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1067204..1077803
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA921_RS04930 | ravI | 1069150..1070157 (-) | 1008 | WP_061637670.1 | Dot/Icm T4SS effector RavI | - |
| CA921_RS04935 | pilM | 1070574..1071638 (+) | 1065 | WP_011215094.1 | type IV pilus assembly protein PilM | Machinery gene |
| CA921_RS04940 | pilN | 1071642..1072190 (+) | 549 | WP_010946663.1 | PilN domain-containing protein | Machinery gene |
| CA921_RS04945 | pilO | 1072204..1072803 (+) | 600 | WP_011215096.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CA921_RS04950 | pilP | 1072800..1073384 (+) | 585 | WP_027266404.1 | pilus assembly protein PilP | Machinery gene |
| CA921_RS04955 | pilQ | 1073388..1075484 (+) | 2097 | WP_011215098.1 | type IV pilus secretin PilQ | Machinery gene |
| CA921_RS04960 | aroK | 1075929..1076456 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
| CA921_RS04965 | aroB | 1076443..1077552 (+) | 1110 | WP_061692110.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22482.18 Da Isoelectric Point: 5.3369
>NTDB_id=229662 CA921_RS04945 WP_011215096.1 1072204..1072803(+) (pilO) [Legionella pneumophila subsp. pneumophila strain Allentown]
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=229662 CA921_RS04945 WP_011215096.1 1072204..1072803(+) (pilO) [Legionella pneumophila subsp. pneumophila strain Allentown]
ATGGACACGGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGTATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAGTTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCAGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTGGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCATCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
ATGGACACGGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGTATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAGTTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCAGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTGGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCATCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
98.995 |
100 |
0.99 |
| comO | Acinetobacter baylyi ADP1 |
39.894 |
94.472 |
0.377 |
| pilO | Acinetobacter baumannii D1279779 |
37.696 |
95.98 |
0.362 |