Detailed information
Bioinformatically predicted
Overview
| Name | pilB | Type | Machinery gene |
| Locus tag | CA930_RS07410 | Genome accession | NZ_CP021263 |
| Coordinates | 1643526..1645250 (+) | Length | 574 a.a. |
| NCBI ID | WP_027227022.1 | Uniprot ID | A0A2S6EZP9 |
| Organism | Legionella pneumophila subsp. fraseri strain D-3137 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1638526..1650250
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA930_RS07390 | - | 1638819..1641347 (+) | 2529 | WP_027227019.1 | EAL domain-containing protein | - |
| CA930_RS07395 | - | 1641349..1641918 (-) | 570 | WP_027221706.1 | hypoxanthine-guanine phosphoribosyltransferase | - |
| CA930_RS07400 | - | 1641961..1642287 (-) | 327 | WP_027227020.1 | DUF1820 family protein | - |
| CA930_RS07405 | - | 1642470..1643213 (-) | 744 | WP_027227021.1 | methyltransferase domain-containing protein | - |
| CA930_RS07410 | pilB | 1643526..1645250 (+) | 1725 | WP_027227022.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| CA930_RS07415 | pilC | 1645256..1646476 (+) | 1221 | WP_027221710.1 | type II secretion system F family protein | Machinery gene |
| CA930_RS07420 | pilD | 1646522..1647385 (+) | 864 | WP_027227023.1 | A24 family peptidase | Machinery gene |
| CA930_RS07425 | - | 1647399..1648604 (-) | 1206 | WP_027227024.1 | cyclic nucleotide-binding domain-containing protein | - |
| CA930_RS07430 | - | 1648714..1649307 (-) | 594 | WP_027227025.1 | hypothetical protein | - |
| CA930_RS07435 | - | 1649323..1649778 (-) | 456 | WP_027227026.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 574 a.a. Molecular weight: 62645.11 Da Isoelectric Point: 5.4362
>NTDB_id=229254 CA930_RS07410 WP_027227022.1 1643526..1645250(+) (pilB) [Legionella pneumophila subsp. fraseri strain D-3137]
MALATDEYRLQGIGQLLVLEKLLDKTKAIELHKLAAAEKISLVQYLVKNKILSAEQIALTAAQNFGVPMMDINCIEVDSI
PASLVNEKLIKRHAMVPLFSRGTNLYLATDDPSKQASLKEIQFHTGLNTHAIVVETDKLSSLIDNLLTAKESQGLSDYVE
DSGDLEGLEISTEDEDQDVDTATSATDDAPIVKFVNKILLDAIRQGASDIHFEPYEREYRIRYRQDGILHEVATPPASLA
SRITARIKVMSNLDISERRIPQDGGFKMKISKARAIDFRVSTCPTSAGEKVVMRVLDSGAAKLGIEALGFNPVQRSNFIK
AIQRPQGMILVTGPTGSGKTVTLYTALNILNTIEVNISTAEDPVEIKVPGINQVNINPKAGLTFSGALRSFLRQDPDIIM
VGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETLNRLVNMGIPTFNIASSVTLIIAQRLARKLCNQCKAVRDDFTNQG
LIELGFKEADLVNLKLYKAVGCDQCTSGYRGRVGLFEVLPMTKELGQLIMSGGNSLDILKLAQSEGMLTIFQSGIEKVKE
GITTIEEVNRVTVD
MALATDEYRLQGIGQLLVLEKLLDKTKAIELHKLAAAEKISLVQYLVKNKILSAEQIALTAAQNFGVPMMDINCIEVDSI
PASLVNEKLIKRHAMVPLFSRGTNLYLATDDPSKQASLKEIQFHTGLNTHAIVVETDKLSSLIDNLLTAKESQGLSDYVE
DSGDLEGLEISTEDEDQDVDTATSATDDAPIVKFVNKILLDAIRQGASDIHFEPYEREYRIRYRQDGILHEVATPPASLA
SRITARIKVMSNLDISERRIPQDGGFKMKISKARAIDFRVSTCPTSAGEKVVMRVLDSGAAKLGIEALGFNPVQRSNFIK
AIQRPQGMILVTGPTGSGKTVTLYTALNILNTIEVNISTAEDPVEIKVPGINQVNINPKAGLTFSGALRSFLRQDPDIIM
VGEIRDLETAEIAVKAAQTGHLVLSTLHTNSAAETLNRLVNMGIPTFNIASSVTLIIAQRLARKLCNQCKAVRDDFTNQG
LIELGFKEADLVNLKLYKAVGCDQCTSGYRGRVGLFEVLPMTKELGQLIMSGGNSLDILKLAQSEGMLTIFQSGIEKVKE
GITTIEEVNRVTVD
Nucleotide
Download Length: 1725 bp
>NTDB_id=229254 CA930_RS07410 WP_027227022.1 1643526..1645250(+) (pilB) [Legionella pneumophila subsp. fraseri strain D-3137]
ATGGCTCTAGCTACAGATGAATATAGACTACAGGGAATTGGCCAGCTTCTAGTACTGGAAAAGTTGCTAGATAAAACCAA
AGCAATTGAGTTGCATAAATTGGCCGCAGCAGAAAAGATATCTTTAGTGCAATATCTTGTAAAAAATAAAATACTATCTG
CTGAACAAATTGCACTGACGGCTGCTCAAAATTTTGGCGTACCAATGATGGATATTAATTGCATTGAGGTGGACTCTATT
CCTGCGAGTCTGGTTAATGAGAAATTGATTAAACGTCATGCCATGGTCCCCCTGTTTAGTCGCGGCACTAACTTGTACCT
TGCAACAGATGATCCCAGTAAGCAAGCTTCATTAAAGGAAATTCAATTTCATACCGGACTGAATACTCATGCTATAGTTG
TAGAAACAGATAAACTGAGTTCTTTGATTGATAACTTATTAACAGCAAAGGAAAGTCAAGGCTTATCGGACTATGTCGAA
GACTCTGGTGATCTGGAAGGTTTGGAAATAAGTACCGAAGATGAAGATCAAGATGTTGATACAGCAACATCTGCAACAGA
TGATGCACCGATTGTAAAGTTCGTTAATAAAATTTTATTGGATGCGATAAGGCAAGGCGCTTCTGATATACATTTTGAGC
CTTATGAACGAGAATACCGGATCAGGTACAGGCAAGATGGTATTTTACATGAGGTAGCTACCCCACCGGCAAGCCTGGCA
TCCCGTATTACAGCGCGTATCAAGGTAATGTCTAATTTGGATATATCAGAGAGGCGTATACCCCAGGATGGCGGCTTTAA
AATGAAAATATCCAAAGCACGAGCGATTGATTTCAGAGTGAGCACCTGTCCAACCTCAGCCGGGGAAAAAGTGGTGATGC
GAGTACTTGATTCTGGTGCTGCTAAATTAGGTATTGAAGCATTAGGATTTAATCCTGTTCAGAGGTCCAATTTCATTAAA
GCAATCCAGCGCCCACAGGGAATGATTTTAGTGACAGGCCCAACAGGTAGTGGAAAAACAGTTACCTTATATACGGCTTT
GAATATATTAAATACAATTGAAGTGAACATTTCGACTGCAGAGGATCCTGTTGAAATCAAGGTACCTGGCATCAATCAGG
TTAATATTAATCCTAAAGCCGGCCTAACCTTTTCCGGTGCATTGCGCTCGTTTCTAAGGCAAGACCCTGATATTATCATG
GTTGGTGAGATACGAGATCTTGAAACAGCTGAAATTGCTGTAAAAGCTGCGCAGACAGGGCATTTGGTTCTTTCTACACT
GCATACCAACAGTGCTGCTGAAACATTAAATCGTTTAGTGAACATGGGGATACCTACTTTTAACATTGCGAGTTCAGTTA
CATTAATTATTGCACAAAGGCTGGCAAGAAAATTATGTAATCAATGTAAGGCAGTGCGCGATGACTTTACCAATCAAGGT
TTGATTGAATTAGGCTTCAAGGAAGCTGATCTGGTTAATCTTAAATTATACAAAGCAGTAGGTTGTGATCAATGCACAAG
TGGCTATCGCGGGCGGGTTGGTCTGTTTGAGGTTTTACCAATGACGAAAGAGCTAGGCCAGTTGATTATGTCAGGTGGTA
ACTCCCTGGATATCTTAAAATTAGCCCAATCTGAAGGTATGCTGACTATCTTTCAATCGGGCATAGAAAAAGTCAAGGAA
GGGATCACAACCATAGAGGAGGTCAATCGGGTAACCGTTGATTAA
ATGGCTCTAGCTACAGATGAATATAGACTACAGGGAATTGGCCAGCTTCTAGTACTGGAAAAGTTGCTAGATAAAACCAA
AGCAATTGAGTTGCATAAATTGGCCGCAGCAGAAAAGATATCTTTAGTGCAATATCTTGTAAAAAATAAAATACTATCTG
CTGAACAAATTGCACTGACGGCTGCTCAAAATTTTGGCGTACCAATGATGGATATTAATTGCATTGAGGTGGACTCTATT
CCTGCGAGTCTGGTTAATGAGAAATTGATTAAACGTCATGCCATGGTCCCCCTGTTTAGTCGCGGCACTAACTTGTACCT
TGCAACAGATGATCCCAGTAAGCAAGCTTCATTAAAGGAAATTCAATTTCATACCGGACTGAATACTCATGCTATAGTTG
TAGAAACAGATAAACTGAGTTCTTTGATTGATAACTTATTAACAGCAAAGGAAAGTCAAGGCTTATCGGACTATGTCGAA
GACTCTGGTGATCTGGAAGGTTTGGAAATAAGTACCGAAGATGAAGATCAAGATGTTGATACAGCAACATCTGCAACAGA
TGATGCACCGATTGTAAAGTTCGTTAATAAAATTTTATTGGATGCGATAAGGCAAGGCGCTTCTGATATACATTTTGAGC
CTTATGAACGAGAATACCGGATCAGGTACAGGCAAGATGGTATTTTACATGAGGTAGCTACCCCACCGGCAAGCCTGGCA
TCCCGTATTACAGCGCGTATCAAGGTAATGTCTAATTTGGATATATCAGAGAGGCGTATACCCCAGGATGGCGGCTTTAA
AATGAAAATATCCAAAGCACGAGCGATTGATTTCAGAGTGAGCACCTGTCCAACCTCAGCCGGGGAAAAAGTGGTGATGC
GAGTACTTGATTCTGGTGCTGCTAAATTAGGTATTGAAGCATTAGGATTTAATCCTGTTCAGAGGTCCAATTTCATTAAA
GCAATCCAGCGCCCACAGGGAATGATTTTAGTGACAGGCCCAACAGGTAGTGGAAAAACAGTTACCTTATATACGGCTTT
GAATATATTAAATACAATTGAAGTGAACATTTCGACTGCAGAGGATCCTGTTGAAATCAAGGTACCTGGCATCAATCAGG
TTAATATTAATCCTAAAGCCGGCCTAACCTTTTCCGGTGCATTGCGCTCGTTTCTAAGGCAAGACCCTGATATTATCATG
GTTGGTGAGATACGAGATCTTGAAACAGCTGAAATTGCTGTAAAAGCTGCGCAGACAGGGCATTTGGTTCTTTCTACACT
GCATACCAACAGTGCTGCTGAAACATTAAATCGTTTAGTGAACATGGGGATACCTACTTTTAACATTGCGAGTTCAGTTA
CATTAATTATTGCACAAAGGCTGGCAAGAAAATTATGTAATCAATGTAAGGCAGTGCGCGATGACTTTACCAATCAAGGT
TTGATTGAATTAGGCTTCAAGGAAGCTGATCTGGTTAATCTTAAATTATACAAAGCAGTAGGTTGTGATCAATGCACAAG
TGGCTATCGCGGGCGGGTTGGTCTGTTTGAGGTTTTACCAATGACGAAAGAGCTAGGCCAGTTGATTATGTCAGGTGGTA
ACTCCCTGGATATCTTAAAATTAGCCCAATCTGAAGGTATGCTGACTATCTTTCAATCGGGCATAGAAAAAGTCAAGGAA
GGGATCACAACCATAGAGGAGGTCAATCGGGTAACCGTTGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilB | Legionella pneumophila strain ERS1305867 |
96.341 |
100 |
0.963 |
| pilB | Acinetobacter baumannii D1279779 |
51.146 |
98.78 |
0.505 |
| pilB | Acinetobacter baylyi ADP1 |
49.315 |
100 |
0.502 |
| pilB | Vibrio cholerae strain A1552 |
49.723 |
94.251 |
0.469 |
| pilB | Vibrio campbellii strain DS40M4 |
47.397 |
97.038 |
0.46 |
| pilF | Neisseria gonorrhoeae MS11 |
46.466 |
98.606 |
0.458 |
| pilB | Vibrio parahaemolyticus RIMD 2210633 |
48.513 |
93.728 |
0.455 |
| pilB | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
39.887 |
92.16 |
0.368 |
| pilF | Thermus thermophilus HB27 |
38.806 |
93.38 |
0.362 |