Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   B9N48_RS15855 Genome accession   NZ_CP021169
Coordinates   3020107..3022416 (-) Length   769 a.a.
NCBI ID   WP_086344258.1    Uniprot ID   -
Organism   Bacillus subtilis strain TLO3     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3015107..3027416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9N48_RS15815 mrpB 3015574..3016005 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  B9N48_RS15820 mrpC 3016005..3016346 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  B9N48_RS15825 mrpD 3016339..3017820 (+) 1482 WP_032726793.1 Na+/H+ antiporter subunit D -
  B9N48_RS15830 mrpE 3017826..3018302 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  B9N48_RS15835 mrpF 3018302..3018586 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  B9N48_RS15840 mnhG 3018570..3018944 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  B9N48_RS15845 yuxO 3018983..3019363 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  B9N48_RS15850 comA 3019382..3020026 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  B9N48_RS15855 comP 3020107..3022416 (-) 2310 WP_086344258.1 two-component system sensor histidine kinase ComP Regulator
  B9N48_RS15860 comX 3022431..3022598 (-) 168 WP_038828676.1 competence pheromone ComX Regulator
  B9N48_RS15865 comQ 3022586..3023485 (-) 900 WP_086344259.1 polyprenyl synthetase family protein Regulator
  B9N48_RS15870 degQ 3023670..3023810 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  B9N48_RS20705 - 3024032..3024157 (+) 126 WP_003228793.1 hypothetical protein -
  B9N48_RS15875 - 3024272..3024640 (+) 369 WP_017695529.1 hypothetical protein -
  B9N48_RS15880 pdeH 3024616..3025845 (-) 1230 WP_049140563.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89368.04 Da        Isoelectric Point: 7.6339

>NTDB_id=228793 B9N48_RS15855 WP_086344258.1 3020107..3022416(-) (comP) [Bacillus subtilis strain TLO3]
MKNLIKKFTIAVIVLSILYISYTTYISMNGIIIGTKVQKNDKSQFVIEEISKSSYGQFVGLRQGDIILKINEEKPSDKHL
KWGYLSHINSLDILXXXHSLHLKDFDLVTLNRSYSFFLFVLPLVFYFLSIICIFYIFKVNKKRRSFAAYILILLLLDISI
AYISAGGPFRGHIINRYINLFTFISSPILYLQFIQTYLGEIGKTFLNRISFLYIIPIFNLGIEFFQDYLQVDIDFLATVN
LVSFAILTLFSFSAIYFHLNKYKYAEHSFILKLLILTNTLSFAPFLIFFVLPIIFTGNYIFPALASASLLVLIPFGLVYQ
FVANKMFDIEFILGRMRYYALLAMIPTLLIVGALVLFDVMEIQMNPLRQTVFFFVVMFAVFYFKEVIDFKFRLKRFSEKF
NYQDSIFKYTQLMRGVTSLQQVFKELKKTILDVLHVSKAYTFEVTPDHKVIFLDKHEIEPEWHLYKEEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVLHIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDG
VGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=228793 B9N48_RS15855 WP_086344258.1 3020107..3022416(-) (comP) [Bacillus subtilis strain TLO3]
TTGAAGAACTTGATAAAAAAATTCACAATAGCTGTAATTGTTTTGAGTATCCTCTATATAAGCTATACAACTTATATTAG
TATGAATGGGATTATTATTGGGACTAAGGTTCAAAAAAATGATAAAAGTCAATTTGTAATAGAAGAAATATCAAAATCTT
CATATGGACAATTTGTTGGTCTGAGACAGGGAGATATCATATTAAAAATCAATGAAGAAAAACCTTCAGACAAACATTTG
AAATGGGGATATTTGAGTCATATTAACAGTTTGGATATTTTAWGAAGWTKACACTCCCTTCATCTCAAAGATTTTGATTT
AGTTACTCTAAATAGATCTTATAGTTTTTTTCTGTTCGTACTTCCTTTGGTTTTTTACTTTTTAAGCATAATATGCATTT
TTTATATATTTAAGGTAAATAAAAAAAGGAGATCATTTGCTGCCTATATTCTTATTCTATTGTTATTAGACATTTCGATA
GCATATATAAGTGCAGGTGGACCATTTAGAGGACATATAATCAATCGGTATATTAACTTGTTTACTTTTATATCTTCTCC
TATTCTTTATCTTCAATTTATACAAACATACCTTGGAGAAATAGGAAAAACTTTTTTGAATAGAATCTCCTTTCTTTATA
TCATACCAATATTTAATCTTGGAATTGAGTTTTTTCAAGACTATTTACAAGTAGATATTGATTTTTTAGCGACTGTTAAC
TTGGTTTCTTTTGCAATTTTGACTCTATTTTCTTTTTCAGCGATATATTTTCATCTTAATAAATATAAATATGCTGAGCA
TTCGTTTATTCTTAAATTACTAATTTTAACAAACACTTTATCATTTGCGCCTTTTTTGATATTTTTTGTTCTTCCAATAA
TATTTACAGGTAATTATATTTTCCCGGCATTAGCTTCGGCGTCATTACTAGTACTAATTCCGTTCGGGTTAGTATACCAA
TTTGTAGCCAATAAGATGTTTGATATAGAGTTTATCTTAGGAAGAATGAGATACTATGCTCTACTTGCCATGATACCAAC
TCTTCTTATAGTTGGTGCATTAGTTCTGTTTGATGTAATGGAAATACAGATGAATCCTTTACGCCAAACGGTATTTTTTT
TCGTTGTCATGTTCGCTGTCTTTTATTTTAAAGAGGTCATAGATTTTAAATTTCGGTTAAAACGTTTCTCTGAAAAATTC
AACTATCAGGACAGTATCTTTAAATATACTCAGCTAATGAGAGGTGTAACTTCTCTTCAACAAGTCTTTAAAGAACTGAA
AAAAACTATTTTGGATGTTTTACATGTAAGCAAAGCTTATACCTTTGAGGTAACTCCTGATCACAAAGTGATATTTTTAG
ATAAGCATGAAATCGAACCGGAATGGCATCTTTATAAAGAGGAGTTTGAAAACGTAACATCAGAAATCGGGAAAATTATA
GAAGTCAATCAAGGCTTTCTTATGAAAGTTGGTGAACGAGGTGGAAGTTCTTATGTTCTGCTTTGTTTATCTAATATTAA
CACTCCCCGGCTAACACGTGATGAAATATCGTGGCTGAAAACACTGTCTTTTTATACAAGTGTGTCCATGGAAAATGTTC
TGCATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAGCAAGAGGGAACCAACCCGATATGGCTGAAAAAGCTAATG
TTTGCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGTGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAA
ACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTAC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGAT
CTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCACATTCGTTTAAATACCGG
AAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCA
AGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGC
GTTGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTT
AGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

96.229

100

0.962


Multiple sequence alignment