Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | B0B39_RS04400 | Genome accession | NZ_CP020894 |
| Coordinates | 993710..994309 (+) | Length | 199 a.a. |
| NCBI ID | WP_012978910.1 | Uniprot ID | D3HQQ1 |
| Organism | Legionella longbeachae strain F1157CHC | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 988710..999309
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B0B39_RS04385 (B0B39_15750) | - | 990414..991844 (-) | 1431 | WP_085662863.1 | M protein | - |
| B0B39_RS04390 (B0B39_15755) | pilM | 992081..993145 (+) | 1065 | WP_003632474.1 | type IV pilus assembly protein PilM | Machinery gene |
| B0B39_RS04395 (B0B39_15760) | pilN | 993150..993713 (+) | 564 | WP_003632473.1 | PilN domain-containing protein | Machinery gene |
| B0B39_RS04400 (B0B39_15765) | pilO | 993710..994309 (+) | 600 | WP_012978910.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| B0B39_RS04405 (B0B39_15770) | pilP | 994306..994812 (+) | 507 | WP_003632471.1 | pilus assembly protein PilP | Machinery gene |
| B0B39_RS04410 (B0B39_15775) | pilQ | 994821..996926 (+) | 2106 | WP_012978911.1 | type IV pilus secretin PilQ | Machinery gene |
| B0B39_RS04415 (B0B39_15780) | aroK | 997262..997789 (+) | 528 | WP_003632469.1 | shikimate kinase AroK | - |
| B0B39_RS04420 (B0B39_15785) | aroB | 997776..998879 (+) | 1104 | WP_003632468.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22815.54 Da Isoelectric Point: 6.2556
>NTDB_id=226961 B0B39_RS04400 WP_012978910.1 993710..994309(+) (pilO) [Legionella longbeachae strain F1157CHC]
MNTINLSELTLENVGQWPLIVKIGMLLGTSLLIIALGYWLIIKDNFTQFDTLKQQETTLKADFENKQRQLYNLPAYRAQL
KTLTGRFASVLTQLPEKNEMPGLLEEISKTGVASGLRFELFAPQPEVVHDFYIELPIKISVVGTYFQLAMFISRVAEMRR
IVTLHDFSIEGETSKDHKVISEDELVMNITAKIYRYRAQ
MNTINLSELTLENVGQWPLIVKIGMLLGTSLLIIALGYWLIIKDNFTQFDTLKQQETTLKADFENKQRQLYNLPAYRAQL
KTLTGRFASVLTQLPEKNEMPGLLEEISKTGVASGLRFELFAPQPEVVHDFYIELPIKISVVGTYFQLAMFISRVAEMRR
IVTLHDFSIEGETSKDHKVISEDELVMNITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=226961 B0B39_RS04400 WP_012978910.1 993710..994309(+) (pilO) [Legionella longbeachae strain F1157CHC]
ATGAACACTATTAATCTCAGTGAATTAACCTTGGAAAATGTAGGGCAATGGCCACTGATAGTAAAAATTGGTATGCTTTT
AGGTACAAGCCTTTTAATTATTGCACTGGGATATTGGCTTATTATTAAAGATAATTTTACTCAGTTTGATACGCTAAAAC
AGCAAGAAACAACTTTAAAAGCTGATTTTGAAAACAAACAACGTCAGCTGTATAATTTACCTGCCTATCGTGCCCAACTA
AAGACTTTGACTGGCCGCTTTGCTTCGGTGCTTACGCAGCTTCCTGAAAAAAATGAAATGCCTGGTTTACTGGAAGAAAT
TTCCAAGACAGGAGTTGCATCAGGTTTAAGGTTTGAGCTATTTGCTCCCCAGCCTGAGGTAGTTCATGATTTTTATATAG
AACTGCCTATAAAAATTTCGGTGGTAGGGACTTATTTTCAATTAGCAATGTTTATTAGTCGAGTTGCTGAAATGAGAAGG
ATTGTTACCTTACATGACTTTAGTATAGAAGGAGAAACATCTAAAGATCATAAGGTTATTTCAGAGGATGAATTGGTGAT
GAATATTACCGCTAAAATATATCGATATCGCGCGCAATGA
ATGAACACTATTAATCTCAGTGAATTAACCTTGGAAAATGTAGGGCAATGGCCACTGATAGTAAAAATTGGTATGCTTTT
AGGTACAAGCCTTTTAATTATTGCACTGGGATATTGGCTTATTATTAAAGATAATTTTACTCAGTTTGATACGCTAAAAC
AGCAAGAAACAACTTTAAAAGCTGATTTTGAAAACAAACAACGTCAGCTGTATAATTTACCTGCCTATCGTGCCCAACTA
AAGACTTTGACTGGCCGCTTTGCTTCGGTGCTTACGCAGCTTCCTGAAAAAAATGAAATGCCTGGTTTACTGGAAGAAAT
TTCCAAGACAGGAGTTGCATCAGGTTTAAGGTTTGAGCTATTTGCTCCCCAGCCTGAGGTAGTTCATGATTTTTATATAG
AACTGCCTATAAAAATTTCGGTGGTAGGGACTTATTTTCAATTAGCAATGTTTATTAGTCGAGTTGCTGAAATGAGAAGG
ATTGTTACCTTACATGACTTTAGTATAGAAGGAGAAACATCTAAAGATCATAAGGTTATTTCAGAGGATGAATTGGTGAT
GAATATTACCGCTAAAATATATCGATATCGCGCGCAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
70.352 |
100 |
0.704 |
| comO | Acinetobacter baylyi ADP1 |
42.021 |
94.472 |
0.397 |
| pilO | Acinetobacter baumannii D1279779 |
38.421 |
95.477 |
0.367 |