Detailed information NTG0022648

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CJE_RS06395
• Genome accession: NC_003912
• Coordinates: 1200904..1201854 (+)
• Length: 316 a.a.
• NCBI ID: WP_011049891.1
• Uniprot ID: -
• Organism: Campylobacter jejuni RM1221
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1195904..1206854

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJE_RS06370 (CJE1278)	-	1195965..1196852 (-)	888	WP_011049886.1	glycosyltransferase family 2 protein	-
CJE_RS06375 (CJE1279)	-	1196845..1198053 (-)	1209	WP_011049887.1	glycosyltransferase family 2 protein	-
CJE_RS06380 (CJE1280)	-	1198131..1199102 (-)	972	WP_011049888.1	glycosyltransferase family 2 protein	-
CJE_RS06385 (CJE1281)	-	1199095..1199982 (-)	888	WP_011049889.1	glycosyltransferase	-
CJE_RS06390 (CJE1282)	waaV	1200036..1200845 (-)	810	WP_011049890.1	glycosyltransferase family 2 protein	-
CJE_RS06395 (CJE1283)	waaF	1200904..1201854 (+)	951	WP_011049891.1	lipopolysaccharide heptosyltransferase II	Regulator
CJE_RS06400 (CJE1284)	-	1201840..1202604 (-)	765	WP_002884483.1	glycosyltransferase family 25 protein	-
CJE_RS06405 (CJE1285)	gmhA	1202604..1203164 (-)	561	WP_002869619.1	D-sedoheptulose 7-phosphate isomerase	-
CJE_RS06410 (CJE1286)	rfaE1	1203161..1204546 (-)	1386	WP_002867399.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CJE_RS06415 (CJE1287)	rfaD	1204539..1205492 (-)	954	WP_002867398.1	ADP-glyceromanno-heptose 6-epimerase	-
CJE_RS06420 (CJE1288)	gmhB	1205493..1206054 (-)	562	Protein_1248	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
CJE_RS06425 (CJE1289)	-	1206135..1206437 (+)	303	WP_002852762.1	c-type cytochrome	-
CJE_RS06430 (CJE1290)	ccoS	1206460..1206666 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36213.76 Da
• Isoelectric Point: 10.2878

>NTDB_id=22648 CJE_RS06395 WP_011049891.1 1200904..1201854(+) (waaF) [Campylobacter jejuni RM1221]
MKIFIHLPTWLGDAVMASPALYVIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENATLVHLNLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=22648 CJE_RS06395 WP_011049891.1 1200904..1201854(+) (waaF) [Campylobacter jejuni RM1221]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGTTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTCACATAAAAGCTCACCTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAATCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGCCCTATGCACATAAGTGCAGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACAAAATTTACTCAAACCTCACC
TTGGCAAAATGAAAACGCAACATTAGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAGTGATTGTAAAAGCGATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.652	99.051	0.918