Detailed information NTG0225158

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: C1N50_RS01945
• Genome accession: NZ_CP026321
• Coordinates: 393464..396286 (-)
• Length: 940 a.a.
• NCBI ID: WP_050905604.1
• Uniprot ID: -
• Organism: Vibrio campbellii strain BoB-53
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 388464..401286

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C1N50_RS01925 (C1N50_01925)	lysC	388556..389908 (-)	1353	WP_103412642.1	lysine-sensitive aspartokinase 3	-
C1N50_RS01935 (C1N50_01935)	-	390434..391555 (+)	1122	WP_103412643.1	alanine--glyoxylate aminotransferase family protein	-
C1N50_RS01940 (C1N50_01940)	-	391612..393396 (-)	1785	WP_103412644.1	PglL family O-oligosaccharyltransferase	-
C1N50_RS01945 (C1N50_01945)	uvrA	393464..396286 (-)	2823	WP_050905604.1	excinuclease ABC subunit UvrA	Machinery gene
C1N50_RS01950 (C1N50_01950)	galU	396425..397297 (-)	873	WP_005432802.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
C1N50_RS01955 (C1N50_01955)	qstR	397462..398106 (-)	645	WP_005432827.1	LuxR C-terminal-related transcriptional regulator	Regulator
C1N50_RS01960 (C1N50_01960)	ssb	398400..398936 (+)	537	WP_005432828.1	single-stranded DNA-binding protein	Machinery gene
C1N50_RS01965 (C1N50_01965)	csrD	399184..401193 (+)	2010	WP_005432793.1	RNase E specificity factor CsrD	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103971.32 Da
• Isoelectric Point: 6.4220

>NTDB_id=225158 C1N50_RS01945 WP_050905604.1 393464..396286(-) (uvrA) [Vibrio campbellii strain BoB-53]
MDKIEVRGARTHNLKDINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHTPLAAQTISQMVDKVLELPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPPLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVAPMDGD
GEEVIFSANFACPICGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDETLSLAQGAIRGWDQKNYYYFQML
TALADHYDFDLHAPFNSLPKKTQDIILKGSGRTEVEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYI
STKSCSSCGGTRLRLEARNVFIADTTLPEIVELSIADALEFFHTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIAVPKERTPRDPKKTVELLGATGNNLKNVDLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAHPSPYKAIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARTFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=225158 C1N50_RS01945 WP_050905604.1 393464..396286(-) (uvrA) [Vibrio campbellii strain BoB-53]
ATGGATAAAATAGAAGTTCGTGGTGCCCGCACCCATAACCTTAAAGACATCAACCTCACTATCCCCCGCGATAAGCTGAT
TGTCATTACTGGTTTGAGTGGTTCTGGTAAATCCTCTCTCGCATTCGATACTTTGTACGCTGAAGGTCAAAGACGTTACG
TAGAGTCACTATCAGCTTACGCGCGCCAATTTTTGTCTCTTATGGAAAAGCCAGATGTTGACCACATCGAAGGTTTGTCT
CCTGCGATCTCGATTGAGCAGAAATCAACATCACACAACCCACGCTCTACTGTTGGTACTATTACTGAGGTGTACGACTA
CCTACGTCTGCTTTATGCTCGCGTTGGTGAACCTCGCTGTCCAACACACCATACGCCTCTAGCCGCTCAAACCATCAGCC
AGATGGTCGATAAAGTCTTAGAGTTGCCAGAAGGCAGCAAAATGATGCTGCTTGCGCCTATCGTGAAAGAGCGTAAAGGT
GAGCACGTTAAGACTTTAGAGAACCTTGCTGCTCAAGGTTTCATCCGCGCACGTATCGATGGTGAAACTTGCGATCTTTC
TGATCCACCGCCGTTAGAACTGCACAAGAAACACACTATTGAAGTGGTTGTGGACCGCTTTAAAGTTCGCCCAGATTTGC
AGCAACGTTTGGCTGAATCATTCGAAACCACACTAGAGCTATCTGGCGGTATTGCTGTTGTTGCTCCAATGGACGGCGAC
GGCGAAGAGGTGATCTTCTCAGCTAACTTTGCTTGCCCTATTTGTGGCTACAGCATGCAAGAACTTGAGCCTCGTTTGTT
CTCATTCAACAACCCAGCAGGTGCGTGTGGCACTTGTGATGGTTTAGGTGTGCAGCAATATTTCGACCCAAGCCGAGTTA
TTCAAGATGAAACTCTGAGTTTGGCACAAGGTGCGATTCGAGGTTGGGATCAAAAGAACTACTATTATTTCCAGATGCTG
ACTGCGCTGGCGGATCATTACGACTTCGATCTTCACGCACCATTTAACTCTCTACCAAAGAAAACCCAAGACATCATCCT
TAAAGGATCGGGGCGTACTGAAGTAGAGTTCAAGTACATTAACGATCGTGGTGACATTCGCGTTAAGCGCCATCCTTTTG
AAGGGATCCTGAACACACTTGAACGCCGTTACCGCGATACTGAATCTAACTCGGTACGTGAAGAGCTTGCGAAATACATC
TCTACTAAGTCTTGCTCAAGCTGTGGTGGTACTCGTCTACGCCTTGAAGCTCGTAACGTTTTTATCGCCGATACGACACT
ACCGGAGATTGTTGAACTCAGCATCGCCGACGCATTGGAATTCTTCCACACTTTGAAGCTCGAAGGCCAACGCGCCCAAA
TCGCTGAAAAAGTGATGAAGGAAATCAACGACCGCCTGCAATTCTTGGTTAACGTTGGTTTGAACTACCTCAACTTATCA
CGTAGCGCGGAAACCTTATCAGGCGGTGAGGCTCAACGTATTCGTTTAGCGAGCCAAATTGGTGCGGGTCTAGTCGGTGT
TATGTACGTACTGGATGAGCCATCAATTGGTCTCCACCAGCGTGATAACGAACGTCTATTGAAAACTCTGACCCACTTAA
GAGATTTAGGTAACACGGTATTAGTGGTTGAGCACGATGAAGATGCGATTCGTTGTGCTGATCACGTGATCGATATCGGT
CCAGGCGCAGGTGTACACGGTGGTAACGTGGTCGCTGAAGGTACGATGGACGAGATCATTGCCAATCCGAACTCACTGAC
TGGTCAGTACCTCAGTGGCGCGAAAGAGATTGCGGTACCAAAAGAGCGTACACCACGCGATCCAAAGAAAACCGTTGAAC
TGCTTGGCGCGACAGGTAACAACTTAAAGAATGTCGACCTTTCCGTTCCTGTTGGCTTGTTCAGCTGTATTACCGGTGTA
TCCGGCTCAGGTAAGTCGACTCTGATCAACGATACCTTCTTTAAGATTGCTCATACCCAGTTGAACGGCGCAACAACGGC
GCACCCTTCACCATACAAAGCGATCAAAGGTTTAGAGCACTTCGATAAAGTTATCGACATTGACCAAAGCCCTATCGGTC
GTACACCACGTTCAAACCCAGCCACTTACACTGGAATCTTTACTCCGATTCGTGAACTGTTTGCGGGCACGCAAGAGTCG
CGCTCTCGTGGTTACAAACCGGGGCGCTTTAGCTTTAACGTACGCGGTGGTCGCTGTGAAGCCTGTCAGGGTGATGGCGT
AATCAAGGTGGAAATGCACTTCTTACCAGATGTCTACGTACCTTGTGATGTGTGTAAAGGTAAACGCTACAACCGCGAAA
CACTTGAAGTACGTTACAAAGGCAAGACCATTGATGAAGTACTGGAAATGACGGTAGAAGATGCACGTACTTTCTTCGAT
CCAGTACCAGCGATTGCTCGTAAGCTGCAAACTCTGATGGATGTCGGTTTGTCTTACATTCGCTTAGGTCAAGCAGCAAC
TACGCTGTCAGGCGGTGAAGCTCAGCGTGTGAAACTTGCTAGAGAGCTGTCTAAGCGTGATACAGGCAAAACCTTATACA
TTTTGGATGAGCCGACAACCGGTCTGCACTTCCACGATATCCAGCAGCTACTAACTGTACTGCACCGTCTGCGCGACCAC
GGAAATACCGTTGTTGTCATCGAACATAACCTCGATGTCATTAAGACGGCAGACTGGATTATCGACTTAGGCCCTGAAGG
TGGACAAGGTGGCGGTGAGATCATTGCACAAGGAACGCCTGAAGATGTGTCTCAGATCGAAGGTTCGCACACAGCTCGCT
TCCTTAAGCCTATGTTGAAGTAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-859)

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.431	100	0.576
uvrA	Streptococcus pneumoniae TIGR4	57.431	100	0.576
uvrA	Streptococcus pneumoniae D39	57.431	100	0.576