Detailed information NTG0224925

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: BSR25_RS08520
• Genome accession: NZ_CP020604
• Coordinates: 1681588..1682004 (-)
• Length: 138 a.a.
• NCBI ID: WP_021216554.1
• Uniprot ID: A0AAC9R430
• Organism: Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1676588..1687004

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR25_RS08480 (BSR25_1677)	-	1676610..1677476 (+)	867	WP_010906309.1	RluA family pseudouridine synthase	-
BSR25_RS08485 (BSR25_1678)	-	1677515..1678324 (-)	810	WP_010906310.1	metal ABC transporter permease	-
BSR25_RS08490 (BSR25_1679)	-	1678317..1679054 (-)	738	WP_010906311.1	metal ABC transporter ATP-binding protein	-
BSR25_RS08495 (BSR25_1680)	-	1679231..1680073 (-)	843	WP_010906312.1	metal ABC transporter substrate-binding protein	-
BSR25_RS08500 (BSR25_1681)	-	1680070..1680507 (-)	438	WP_010906313.1	zinc-dependent MarR family transcriptional regulator	-
BSR25_RS08505 (BSR25_1682)	comGG	1680588..1680872 (-)	285	WP_010906314.1	competence type IV pilus minor pilin ComGG	Machinery gene
BSR25_RS08510 (BSR25_1683)	comGF	1680911..1681357 (-)	447	WP_031296844.1	competence type IV pilus minor pilin ComGF	Machinery gene
BSR25_RS08515	comGE	1681320..1681616 (-)	297	WP_010906316.1	competence type IV pilus minor pilin ComGE	Machinery gene
BSR25_RS08520 (BSR25_1685)	comGD	1681588..1682004 (-)	417	WP_021216554.1	competence type IV pilus minor pilin ComGD	Machinery gene
BSR25_RS08525 (BSR25_1686)	comGC	1681979..1682248 (-)	270	WP_023349160.1	competence type IV pilus major pilin ComGC	Machinery gene
BSR25_RS08530 (BSR25_1687)	-	1682395..1682919 (-)	525	WP_014570795.1	GNAT family N-acetyltransferase	-
BSR25_RS08535 (BSR25_1688)	-	1682998..1683777 (-)	780	WP_058147788.1	peptidoglycan amidohydrolase family protein	-
BSR25_RS08540 (BSR25_1689)	-	1683777..1684076 (-)	300	WP_031559226.1	phage holin	-
BSR25_RS08545 (BSR25_1690)	-	1684089..1684439 (-)	351	WP_023349296.1	hypothetical protein	-
BSR25_RS08550 (BSR25_1691)	-	1684459..1686477 (-)	2019	WP_415880874.1	DUF7013 family protein	-
BSR25_RS08555 (BSR25_1692)	-	1686461..1686634 (-)	174	WP_086383510.1	hypothetical protein	-

Sequence

Protein

• Length: 138 a.a.
• Molecular weight: 15902.69 Da
• Isoelectric Point: 7.9826

>NTDB_id=224925 BSR25_RS08520 WP_021216554.1 1681588..1682004(-) (comGD) [Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03]
MKNEILMTKAFTLLESLLVLLIISFITTLFSLEIIQTIHLFKGELFVLQFENFYKRSQEDAALLQKSESLVAKNQELICE
DRSITIPKEVAVKDFTVKFDDKGENSSLQKLTISLPYEKKFITYQLEIGSGKFKKKIS

Nucleotide

• Length: 417 bp

>NTDB_id=224925 BSR25_RS08520 WP_021216554.1 1681588..1682004(-) (comGD) [Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03]
ATGAAGAACGAAATTTTAATGACTAAAGCATTTACTTTACTAGAGTCTCTTCTAGTTTTGTTGATTATTTCTTTTATCAC
AACTCTTTTTTCTTTAGAAATAATACAAACAATCCATCTTTTTAAGGGAGAATTGTTTGTTCTTCAATTTGAAAATTTCT
ATAAAAGGAGTCAAGAAGATGCTGCACTGCTTCAAAAATCTGAAAGTTTAGTTGCTAAAAATCAAGAATTAATCTGTGAA
GATAGAAGTATCACAATTCCAAAGGAGGTAGCAGTTAAAGATTTTACAGTTAAATTTGATGATAAGGGAGAGAATTCTAG
CTTACAAAAACTCACAATTTCTTTACCTTACGAAAAAAAGTTCATCACTTATCAATTGGAGATAGGCAGTGGAAAATTTA
AAAAGAAAATCAGTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Lactococcus lactis subsp. cremoris KW2	65.942	100	0.659
comYD	Streptococcus gordonii str. Challis substr. CH1	40.458	94.928	0.384
comYD	Streptococcus mutans UA140	40.625	92.754	0.377
comYD	Streptococcus mutans UA159	40.625	92.754	0.377