Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   A6J87_RS08150 Genome accession   NZ_CP020451
Coordinates   1587112..1588197 (+) Length   361 a.a.
NCBI ID   WP_013990226.1    Uniprot ID   A0A1V0H8X8
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1582112..1593197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS08135 (A6J87_08105) amiA 1582652..1584622 (+) 1971 WP_070579760.1 peptide ABC transporter substrate-binding protein Regulator
  A6J87_RS08140 (A6J87_08110) amiC 1584683..1586176 (+) 1494 WP_060971834.1 ABC transporter permease Regulator
  A6J87_RS08145 (A6J87_08115) amiD 1586176..1587102 (+) 927 WP_022496729.1 oligopeptide ABC transporter permease OppC Regulator
  A6J87_RS08150 (A6J87_08120) amiE 1587112..1588197 (+) 1086 WP_013990226.1 ABC transporter ATP-binding protein Regulator
  A6J87_RS08155 (A6J87_08125) amiF 1588190..1589119 (+) 930 WP_002884751.1 ATP-binding cassette domain-containing protein Regulator
  A6J87_RS08160 (A6J87_08130) - 1589172..1589957 (-) 786 WP_070576856.1 ABC transporter permease -
  A6J87_RS08165 (A6J87_08135) - 1589969..1590667 (-) 699 WP_002886849.1 ABC transporter ATP-binding protein -
  A6J87_RS08170 (A6J87_08140) - 1590672..1591049 (-) 378 WP_021143815.1 GntR family transcriptional regulator -
  A6J87_RS08175 (A6J87_08145) - 1591231..1592025 (+) 795 WP_021143816.1 HAD-IIB family hydrolase -
  A6J87_RS08180 (A6J87_08150) - 1592018..1592836 (+) 819 WP_014634817.1 Cof-type HAD-IIB family hydrolase -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 40007.70 Da        Isoelectric Point: 4.6135

>NTDB_id=223274 A6J87_RS08150 WP_013990226.1 1587112..1588197(+) (amiE) [Streptococcus salivarius strain FDAARGOS_259]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGQDL
TKLKSHQDWAPIRGAKIATIFQDPMTSLDPIKTIGSQIVEVIVKHQGKSAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDKGELFSIPGTPPSLYTPVVGDAFALRSDYAMQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVEKPEVIQNLHEKIRTNMGFAHLGDEEEGNA

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=223274 A6J87_RS08150 WP_013990226.1 1587112..1588197(+) (amiE) [Streptococcus salivarius strain FDAARGOS_259]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
CATTCGAGGAGTTTCCCTTGATCTGGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGTAAATCAGTTT
TGACTAAGACTTTCACAGGGATGCTTGAAGAAAATGGTCGTGTAGCTAGCGGTTCTATTGATTATCGTGGCCAAGATTTG
ACCAAACTTAAGAGTCACCAAGATTGGGCACCTATTCGTGGAGCTAAGATCGCGACTATCTTCCAAGATCCTATGACCAG
TCTTGACCCAATTAAGACTATCGGTAGCCAAATTGTTGAAGTCATTGTCAAACACCAAGGAAAATCAGCTAAAGAAGCTA
AAAAAATGGCCATTGATTACATGGACAAGGTTGGTATTCCTGATGCTGAAAAACGTTTCAACGAATATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTCATTGCCATTGCCTTGGCTTGTCGTCCTGATGTCCTTATCTGTGACGAGCCAAC
AACTGCCCTTGATGTGACCATTCAAGCTCAAATCATCGACCTCTTGAAATCACTCAAAGAGGAGTACGGTTTCTCAGTGA
TTTTCATTACCCATGACCTTGGTGTGGTAGCAAGTATCGCTGATAAGGTTGCTGTTATGTATGCTGGTGAAATCATTGAA
TACGCAACTGTTGAGGAAATTTTCTATGAGCCTTGTCACCCATACACTTGGAGCTTGCTTTCAAGCTTGCCACAGTTGGC
TGACGATAAGGGTGAGCTTTTCTCTATTCCAGGGACACCACCATCACTTTATACACCAGTTGTTGGAGATGCCTTTGCCT
TGCGTTCAGACTATGCCATGCAAATTGACTTCGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCACCAAAAGTTGAAAAACCTGAGGTTATCCAAAATCTACATGAAAAAATCCGTACTAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1V0H8X8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

99.169

100

0.992

  amiE Streptococcus thermophilus LMG 18311

96.399

100

0.964

  amiE Streptococcus thermophilus LMD-9

96.399

100

0.964

  oppD Streptococcus mutans UA159

54.728

96.676

0.529


Multiple sequence alignment