Detailed information NTG0223273

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: A6J87_RS08145
• Genome accession: NZ_CP020451
• Coordinates: 1586176..1587102 (+)
• Length: 308 a.a.
• NCBI ID: WP_022496729.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain FDAARGOS_259
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1581176..1592102

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J87_RS08135 (A6J87_08105)	amiA	1582652..1584622 (+)	1971	WP_070579760.1	peptide ABC transporter substrate-binding protein	Regulator
A6J87_RS08140 (A6J87_08110)	amiC	1584683..1586176 (+)	1494	WP_060971834.1	ABC transporter permease	Regulator
A6J87_RS08145 (A6J87_08115)	amiD	1586176..1587102 (+)	927	WP_022496729.1	oligopeptide ABC transporter permease OppC	Regulator
A6J87_RS08150 (A6J87_08120)	amiE	1587112..1588197 (+)	1086	WP_013990226.1	ABC transporter ATP-binding protein	Regulator
A6J87_RS08155 (A6J87_08125)	amiF	1588190..1589119 (+)	930	WP_002884751.1	ATP-binding cassette domain-containing protein	Regulator
A6J87_RS08160 (A6J87_08130)	-	1589172..1589957 (-)	786	WP_070576856.1	ABC transporter permease	-
A6J87_RS08165 (A6J87_08135)	-	1589969..1590667 (-)	699	WP_002886849.1	ABC transporter ATP-binding protein	-
A6J87_RS08170 (A6J87_08140)	-	1590672..1591049 (-)	378	WP_021143815.1	GntR family transcriptional regulator	-
A6J87_RS08175 (A6J87_08145)	-	1591231..1592025 (+)	795	WP_021143816.1	HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34637.76 Da
• Isoelectric Point: 9.7054

>NTDB_id=223273 A6J87_RS08145 WP_022496729.1 1586176..1587102(+) (amiD) [Streptococcus salivarius strain FDAARGOS_259]
MASIDKSKFQFVKRDDFASETIDAPAYSYWKSVMRQFFKKKSTTVMLGILIAIILMSFIYPMFSKFDFNDVSKVNDFSVR
YVHPNAQYWFGTDSNGKSLFDSVWFGARNSILIAVIATFINVVIGLVVGAVWGISKTFDMIMMEIYNIISNIPALLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRTLGTPTPKIVVKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLSLFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=223273 A6J87_RS08145 WP_022496729.1 1586176..1587102(+) (amiD) [Streptococcus salivarius strain FDAARGOS_259]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCGCCGGCCTA
TTCATACTGGAAATCGGTGATGCGTCAGTTCTTCAAGAAAAAGTCAACAACTGTCATGTTGGGAATCTTGATTGCTATCA
TTTTGATGAGCTTTATCTACCCAATGTTTTCAAAATTTGACTTTAATGACGTGTCTAAGGTTAATGACTTTAGTGTACGT
TATGTGCATCCAAATGCTCAATACTGGTTCGGTACGGACAGTAATGGTAAGTCTCTCTTTGACAGTGTTTGGTTTGGAGC
TCGTAATTCTATCCTTATTGCTGTTATCGCTACCTTCATTAACGTTGTTATTGGTTTAGTCGTTGGTGCTGTTTGGGGGA
TTTCTAAGACCTTTGATATGATTATGATGGAAATCTACAACATCATCTCAAACATTCCTGCCCTCCTTGTCGTTATCGTC
TTGACTTACTCATTGGGTGCAGGTTTCTGGAACATGATTTTTGCCATGACTGTCACAGGTTGGATTGGTATTGCTTATAC
TATCCGTATTCAAATCATGCGTTACCGTGATTTGGAGTACAACTTGGCTTCTCGTACTTTGGGAACACCAACTCCTAAGA
TTGTGGTTAAAAATATCATGCCACAACTTGTATCAGTTATCGTGACTATGGCTAGTCAGCTCTTGCCAGGATTTATCTCT
TACGAAGCCTTCCTTTCTTACTTTGGTTTGGGGCTTCCTGTTACAACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCTTATCTCTTCTGGATTCCATTGACTACCTTGATCCTCGTTTCCCTCTCTCTCTTTATTG
TCGGTCAAAACTTGGCGGATGCCAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-70)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	99.351	100	0.994
amiD	Streptococcus thermophilus LMG 18311	95.779	100	0.958
amiD	Streptococcus thermophilus LMD-9	95.779	100	0.958