Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   C2I05_RS15595 Genome accession   NZ_CP026039
Coordinates   2958253..2960067 (+) Length   604 a.a.
NCBI ID   WP_032726627.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK1_2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2953253..2965067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2I05_RS15580 (C2I05_15565) glvR 2954070..2954834 (+) 765 WP_014476181.1 MurR/RpiR family transcriptional regulator GlvR -
  C2I05_RS15585 (C2I05_15570) malP 2954849..2956432 (+) 1584 WP_003233606.1 PTS maltose transporter subunit IIBC -
  C2I05_RS15590 (C2I05_15575) yfiB 2956538..2958259 (+) 1722 WP_120027902.1 ABC transporter ATP-binding protein -
  C2I05_RS15595 (C2I05_15580) rcrQ 2958253..2960067 (+) 1815 WP_032726627.1 ABC transporter ATP-binding protein Regulator
  C2I05_RS15600 (C2I05_15585) catD 2960221..2960625 (+) 405 WP_003244204.1 DoxX family oxidoreductase CatD -
  C2I05_RS15605 (C2I05_15590) catE 2960643..2961500 (+) 858 WP_120027903.1 catechol 2,3-dioxygenase -
  C2I05_RS15610 (C2I05_15595) - 2961618..2962820 (+) 1203 WP_077671670.1 sensor histidine kinase -
  C2I05_RS15615 (C2I05_15600) lnrK 2962817..2963479 (+) 663 WP_032726622.1 two-component system response regulator LnrK -
  C2I05_RS15620 (C2I05_15610) lnrL 2963622..2964557 (+) 936 WP_120027905.1 linearmycin resistance ATP-binding protein LnrL -

Sequence


Protein


Download         Length: 604 a.a.        Molecular weight: 67409.24 Da        Isoelectric Point: 9.7027

>NTDB_id=222992 C2I05_RS15595 WP_032726627.1 2958253..2960067(+) (rcrQ) [Bacillus subtilis strain PK1_2]
MLKDIRKPFQYPKLPIDKKEGAKKRAKAKDTKGTLRRIWSYLAERKGLLILVMLMVVISAIFGLLGPFVIGKAIDHFIVG
KTVSGLIPVLLLLLAIYIIQSLSLWFQNYWMITISQGTVFRMRSELFTHLHELPIPFFDKQRHGELMSRVTNDIENVSST
LNTSVIQILSSVITFVGTIAVMLYMSPLLTLITLTIIPVMAASLKWITNRTGKLFKEQQKNLGDLNGYIEESVSGAKVIK
AYSREKQITAEFLEKNAALKTSGFWAQTISGFIPKVMNSLNNLSFTMIAAIGGLFALKGWISIGSIVVFAEYSRQFTRPL
NDLANQFNTMLSAIAGAERVFDVLDEKEEREDEKNAVHQPIQTGSIEFRDVSFGYDKGQQTLKHLQFTVPAGQSIAFVGP
TGAGKTTVTNLIARFYEPNDGKILIDGIDIKTLTRASLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKTAN
AHSFIERLPKGYDTVLTQNGSGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEALARLMEGRTSVIIAHR
LNTIQRADQIVVLKDGEMIEKGSHDELIRQKGFYSDLYESQFEK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=222992 C2I05_RS15595 WP_032726627.1 2958253..2960067(+) (rcrQ) [Bacillus subtilis strain PK1_2]
ATGCTAAAAGACATCCGCAAGCCTTTCCAATATCCCAAACTGCCAATTGACAAAAAAGAAGGCGCGAAAAAGCGGGCGAA
AGCAAAGGATACAAAGGGCACACTGAGACGAATCTGGTCTTACTTGGCTGAAAGAAAAGGACTGCTCATACTTGTCATGC
TGATGGTTGTCATCAGCGCGATATTCGGGCTCCTTGGCCCCTTTGTGATCGGAAAGGCCATTGACCATTTTATCGTCGGG
AAAACGGTCAGCGGCTTGATTCCCGTTTTGCTTCTTCTGCTCGCTATCTATATCATTCAGTCCCTGTCGCTTTGGTTTCA
AAACTATTGGATGATTACGATCTCGCAGGGCACGGTTTTCAGAATGAGAAGCGAATTGTTCACCCATCTGCATGAGCTGC
CGATTCCATTTTTTGATAAACAGCGGCACGGCGAGCTGATGAGCCGGGTGACGAATGACATCGAAAATGTCAGTTCTACC
TTAAACACGTCAGTCATTCAAATTTTGTCAAGCGTGATCACCTTTGTCGGGACGATTGCGGTGATGCTGTACATGAGCCC
GCTCCTTACATTGATTACGCTGACCATTATTCCGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGC
TGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAA
GCATATTCACGTGAGAAGCAGATTACTGCTGAATTTCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCA
GACGATTTCCGGGTTTATCCCGAAGGTCATGAACTCTTTGAATAACTTAAGCTTTACAATGATAGCGGCAATCGGCGGTT
TGTTTGCGCTGAAAGGCTGGATCTCGATCGGCTCAATCGTCGTCTTTGCCGAGTATTCAAGACAATTTACACGCCCTTTA
AACGATCTGGCCAACCAGTTTAATACGATGCTGTCCGCAATCGCCGGCGCTGAACGGGTGTTTGACGTGCTTGATGAAAA
AGAAGAGCGCGAGGATGAAAAGAACGCCGTGCATCAGCCCATCCAAACAGGCAGCATTGAATTCCGCGATGTGTCCTTCG
GTTACGATAAAGGGCAGCAGACACTGAAGCATTTACAGTTTACCGTGCCTGCGGGGCAGTCCATCGCGTTTGTCGGACCG
ACGGGGGCGGGGAAGACAACCGTCACTAACCTTATCGCCCGTTTTTACGAGCCTAACGATGGAAAAATTTTAATCGACGG
TATAGATATTAAAACCCTTACTAGAGCAAGCCTGAGAAAAAACATGGGGTTTGTTCTTCAGGATTCTTTCTTATTTCAGG
GAACGATCAGAGAAAACATTCGCTACGGCAGGCTAGATGCTTCTGATCAGGAAGTCGAAGCCGCTGCAAAAACAGCGAAT
GCCCATAGTTTTATTGAAAGGCTGCCAAAAGGGTATGACACCGTGCTGACGCAAAACGGTTCGGGCATCAGTCAAGGACA
GAAGCAGTTGATTTCTATAGCGAGGGCGGTGCTTGCCGATCCGGTTCTTCTCATTTTGGATGAGGCAACAAGCAACATTG
ATACCGTTACAGAAGTCAACATTCAAGAAGCGCTCGCCCGTTTAATGGAAGGAAGAACAAGCGTCATCATTGCCCACAGG
CTGAACACCATTCAAAGAGCGGACCAGATTGTGGTGCTAAAAGACGGTGAAATGATTGAAAAAGGCAGCCATGACGAGCT
GATTCGGCAAAAAGGATTTTACAGTGACTTATATGAAAGCCAATTTGAGAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.31

96.026

0.377


Multiple sequence alignment