Detailed information NTG0222972

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C2I05_RS12580
• Genome accession: NZ_CP026039
• Coordinates: 2347414..2348535 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain PK1_2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2342414..2353535

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2I05_RS12555 (C2I05_12545)	ycdA	2342419..2343483 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
C2I05_RS12560	-	2343506..2343637 (-)	132	WP_003246334.1	hypothetical protein	-
C2I05_RS12565 (C2I05_12550)	ycdB	2343811..2345232 (+)	1422	WP_032724851.1	YcdB/YcdC domain-containing protein	-
C2I05_RS12570 (C2I05_12560)	ycdC	2345419..2346780 (+)	1362	WP_032724933.1	YcdB/YcdC domain-containing protein	-
C2I05_RS12575 (C2I05_12565)	cwlK	2346788..2347291 (-)	504	WP_032724854.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
C2I05_RS12580 (C2I05_12570)	rapF	2347414..2348535 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
C2I05_RS12585 (C2I05_12575)	ycdF	2348642..2349418 (+)	777	WP_032724857.1	SDR family oxidoreductase	-
C2I05_RS12590 (C2I05_12580)	ycdG	2349443..2351128 (+)	1686	WP_120027752.1	alpha-glucosidase	-
C2I05_RS12595 (C2I05_12585)	znuA	2351316..2352275 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
C2I05_RS12600 (C2I05_12590)	znuC	2352330..2353025 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=222972 C2I05_RS12580 WP_015715201.1 2347414..2348535(+) (rapF) [Bacillus subtilis strain PK1_2]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=222972 C2I05_RS12580 WP_015715201.1 2347414..2348535(+) (rapF) [Bacillus subtilis strain PK1_2]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAACAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCATTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATTAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405