Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   A6J51_RS06285 Genome accession   NZ_CP020423
Coordinates   1053728..1055224 (+) Length   498 a.a.
NCBI ID   WP_080611137.1    Uniprot ID   -
Organism   Neisseria meningitidis strain FDAARGOS_212     
Function   ssDNA binding (predicted from homology)   
DNA processing

Genomic Context

Location: 1048728..1060224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J51_RS06270 (A6J51_06030) putP 1051385..1052911 (-) 1527 WP_002220352.1 sodium/proline symporter PutP -
  A6J51_RS06280 (A6J51_06040) - 1053394..1053714 (+) 321 WP_080611135.1 accessory factor UbiK family protein -
  A6J51_RS06285 (A6J51_06045) comM 1053728..1055224 (+) 1497 WP_080611137.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  A6J51_RS06290 (A6J51_06050) ftsN 1055330..1056193 (+) 864 WP_002240285.1 cell division protein FtsN -
  A6J51_RS06295 (A6J51_06055) dsbA1 1056196..1056840 (+) 645 WP_002220358.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  A6J51_RS06300 (A6J51_06060) - 1056873..1057694 (+) 822 WP_002220359.1 undecaprenyl-diphosphate phosphatase -
  A6J51_RS06320 (A6J51_06080) - 1058275..1059465 (-) 1191 WP_161976891.1 class I SAM-dependent methyltransferase -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 53648.76 Da        Isoelectric Point: 7.0632

>NTDB_id=222769 A6J51_RS06285 WP_080611137.1 1053728..1055224(+) (comM) [Neisseria meningitidis strain FDAARGOS_212]
MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKESRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGR
FDLPIAIGILAASGQVAPEKLAEYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
GEVAAHLNGIEPLAQTECQVPQMPFEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLSQRLPGILPPL
TEDELVEVWALRSLLPNHQQQLDSHRPFRSPHHSASAAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPL
ENGEIHISRAARQAVYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSLSAAELMQQ
EAGERSASVLERVIAARDKQYARQGKVNAALSVSELDTSVRIQKEAQEALGGLLEKLSLSARSFHRIMRVARTLADLAGD
EEVGRSHVMKAIGFRRAL

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=222769 A6J51_RS06285 WP_080611137.1 1053728..1055224(+) (comM) [Neisseria meningitidis strain FDAARGOS_212]
ATGTCGCTTGCCTTGGTTTACAGCCGCGCCTTGAGCGGTATGAATGCGCCGTTGGTCGAAGTGGAAGCCCACCTTGCCAA
CGGCCTGCCGCATTTCAACATCGTCGGGCTGCCCGATACGGAAGTAAAGGAAAGCCGCGACCGCGTCCGTGCCGCCATTA
TTCAAAGCGGTTTTGAATTCCCCGCCAAAAAAATTACCGTCAACCTCGCCCCCGCCGACCTGCCCAAAGAGTCGGGGCGT
TTCGATTTGCCGATTGCAATCGGCATCCTTGCCGCATCGGGGCAGGTTGCGCCCGAAAAACTGGCGGAATACGAGTTTGC
GGGGGAATTGGCACTGTCGGGGCTGTTGCGCCCCGTGCGCGGCGCGTTGGCGATGGCGTGGCAGGGTATGCAGGCAAAAC
GTGCATTTGTTTTGCCTGAAGAAAACGCAGGACAAGCCGCCGTGATGCGCGGCATTACCGTTTACGGCGCGCGCTCTTTG
GGCGAAGTCGCCGCCCATTTGAACGGCATCGAACCTTTGGCGCAAACCGAATGCCAAGTTCCTCAGATGCCGTTTGAACA
TGGCGGACAACCTGATTTGTGCGATGTGAAAGGTCAGCACACCGCGCGCCTTGCTTTGGAAATCGCTGCCGCAGGCGGAC
ACAGCCTCTTGATGATGGGTCCGCCGGGAACGGGCAAGTCTATGCTCTCCCAACGGCTGCCCGGCATCCTGCCGCCGCTG
ACCGAAGACGAATTGGTAGAAGTTTGGGCATTGCGTTCGCTCCTGCCCAACCACCAGCAACAACTCGACAGCCACCGTCC
TTTCCGCAGTCCGCATCACAGCGCCAGTGCGGCGGCTATGGTCGGCGGCGGTTCGGATCCGCGTCCGGGCGAAATTTCAT
TGGCGCACCACGGCGTTTTGTTTTTGGACGAGCTGCCCGAGTTTGACCGCAAAGTTTTGGAAGTTTTGCGCGAACCGTTG
GAAAACGGCGAAATCCACATTTCCCGCGCGGCGCGCCAAGCCGTCTATCCGGCGAAATTCCAACTTGTTGCCGCCATGAA
CCCCTGCCCGTGCGGTTATCTCGGGCATCCCGTCAAACCCTGCCGCTGCACGCCCGAAAGCGTCGCGCGTTACCGCAGCA
AGATTTCCGGGCCGCTGCTCGACCGCATCGATTTGACCATCGAAGTCCCGAGCCTGTCCGCCGCCGAACTGATGCAGCAG
GAAGCAGGGGAAAGGAGCGCGTCCGTTTTGGAACGCGTTATCGCCGCTAGAGACAAACAATACGCACGGCAAGGCAAAGT
GAATGCCGCCTTGAGTGTCAGTGAACTCGACACATCCGTCCGCATTCAAAAAGAAGCGCAGGAAGCATTGGGCGGCCTGC
TGGAAAAACTCTCCCTTTCCGCCCGCAGCTTCCACCGCATTATGCGCGTGGCGCGTACATTGGCGGATTTGGCGGGCGAC
GAAGAAGTCGGCAGAAGCCACGTCATGAAAGCCATAGGTTTCCGTCGTGCTTTATAG

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(192-396)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(403-495)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Vibrio cholerae strain A1552

52.988

100

0.534
  comM Vibrio campbellii strain DS40M4

52.4

100

0.526
  comM Haemophilus influenzae Rd KW20

50

100

0.504
  comM Glaesserella parasuis strain SC1401

49.008

100

0.496
  comM Legionella pneumophila str. Paris

46.535

100

0.472
  comM Legionella pneumophila strain ERS1305867

46.535

100

0.472
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

42.633

100

0.436

Multiple sequence alignment