Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | A6J44_RS01730 | Genome accession | NZ_CP020418 |
| Coordinates | 225174..225680 (+) | Length | 168 a.a. |
| NCBI ID | WP_082295363.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain FDAARGOS_205 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 220174..230680
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J44_RS01675 (A6J44_01650) | - | 220421..220771 (+) | 351 | Protein_246 | pilin | - |
| A6J44_RS01680 (A6J44_01655) | - | 220798..221190 (+) | 393 | Protein_247 | pilin | - |
| A6J44_RS01695 (A6J44_01670) | - | 221585..221962 (+) | 378 | Protein_248 | pilin | - |
| A6J44_RS01700 (A6J44_01675) | - | 221962..222315 (+) | 354 | Protein_249 | pilin | - |
| A6J44_RS01710 (A6J44_01685) | lpxC | 222898..223821 (+) | 924 | WP_003687007.1 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | - |
| A6J44_RS01715 (A6J44_01695) | pilE | 223927..224358 (+) | 432 | WP_082295362.1 | pilin | Machinery gene |
| A6J44_RS01730 (A6J44_01710) | pilE | 225174..225680 (+) | 507 | WP_082295363.1 | pilin | Machinery gene |
| A6J44_RS01740 (A6J44_01720) | - | 226045..226869 (+) | 825 | WP_082295364.1 | opacity family porin | - |
| A6J44_RS01745 (A6J44_01725) | pilA | 227135..228388 (-) | 1254 | WP_047920694.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| A6J44_RS01755 (A6J44_01735) | msrAB | 228534..230102 (+) | 1569 | WP_003696503.1 | bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB | - |
| A6J44_RS01760 (A6J44_01740) | - | 230186..230668 (-) | 483 | WP_003694396.1 | CinA family protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 18082.33 Da Isoelectric Point: 7.1337
>NTDB_id=222517 A6J44_RS01730 WP_082295363.1 225174..225680(+) (pilE) [Neisseria gonorrhoeae strain FDAARGOS_205]
MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGEWPKDNDSAGVASSSSIK
GKYVKEVKVENGVVTATMNSSNVNKEIKDKRLSLWGRRENGSVKWFCGQPVTRNANDDTVTADGTGNDGKIDTKHLPSTC
RDTSSAGT
MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGEWPKDNDSAGVASSSSIK
GKYVKEVKVENGVVTATMNSSNVNKEIKDKRLSLWGRRENGSVKWFCGQPVTRNANDDTVTADGTGNDGKIDTKHLPSTC
RDTSSAGT
Nucleotide
Download Length: 507 bp
>NTDB_id=222517 A6J44_RS01730 WP_082295363.1 225174..225680(+) (pilE) [Neisseria gonorrhoeae strain FDAARGOS_205]
ATGAATACCCTTCAAAAAGGCTTTACCCTTATCGAGCTGATGATTGTGATCGCCATCGTCGGCATTTTGGCGGCAGTCGC
CCTTCCGGCATACCAAGACTACACCGCCCGCGCGCAAGTTTCCGAAGCCATCCTTTTGGCCGAAGGTCAAAAATCAGCCG
TTACCGAGTATTACCTGAATCACGGCGAATGGCCCAAAGACAACGACTCTGCCGGCGTGGCATCTTCTTCATCAATCAAA
GGCAAATATGTTAAGGAAGTTAAAGTCGAAAACGGCGTCGTCACCGCCACAATGAATTCAAGCAACGTAAACAAAGAAAT
CAAAGACAAAAGACTCTCCCTGTGGGGCAGGCGTGAAAACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTACGCGCA
ACGCCAACGACGACACCGTCACCGCCGACGGCACCGGCAACGACGGCAAAATCGACACCAAGCACCTGCCGTCAACCTGC
CGCGATACGTCATCTGCCGGTACGTGA
ATGAATACCCTTCAAAAAGGCTTTACCCTTATCGAGCTGATGATTGTGATCGCCATCGTCGGCATTTTGGCGGCAGTCGC
CCTTCCGGCATACCAAGACTACACCGCCCGCGCGCAAGTTTCCGAAGCCATCCTTTTGGCCGAAGGTCAAAAATCAGCCG
TTACCGAGTATTACCTGAATCACGGCGAATGGCCCAAAGACAACGACTCTGCCGGCGTGGCATCTTCTTCATCAATCAAA
GGCAAATATGTTAAGGAAGTTAAAGTCGAAAACGGCGTCGTCACCGCCACAATGAATTCAAGCAACGTAAACAAAGAAAT
CAAAGACAAAAGACTCTCCCTGTGGGGCAGGCGTGAAAACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTACGCGCA
ACGCCAACGACGACACCGTCACCGCCGACGGCACCGGCAACGACGGCAAAATCGACACCAAGCACCTGCCGTCAACCTGC
CGCGATACGTCATCTGCCGGTACGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
85.03 |
99.405 |
0.845 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
79.518 |
98.81 |
0.786 |
| comP | Acinetobacter baylyi ADP1 |
38.69 |
100 |
0.387 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
32.804 |
100 |
0.369 |