Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | A6J53_RS03290 | Genome accession | NZ_CP020401 |
| Coordinates | 514269..514775 (-) | Length | 168 a.a. |
| NCBI ID | WP_105166339.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain FDAARGOS_214 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 509269..519775
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J53_RS03260 (A6J53_03190) | gnd | 509656..511104 (-) | 1449 | WP_002256243.1 | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | - |
| A6J53_RS03270 (A6J53_03210) | lpxC | 512286..513209 (-) | 924 | WP_002240158.1 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | - |
| A6J53_RS03290 (A6J53_03220) | pilE | 514269..514775 (-) | 507 | WP_105166339.1 | pilin | Machinery gene |
| A6J53_RS03315 (A6J53_03235) | - | 516508..516915 (-) | 408 | Protein_504 | pilin | - |
| A6J53_RS03330 (A6J53_03250) | - | 517265..518016 (+) | 752 | WP_096001759.1 | IS5-like element IS1301 family transposase | - |
| A6J53_RS03335 (A6J53_03255) | - | 518237..518608 (-) | 372 | Protein_506 | pilin | - |
| A6J53_RS03345 (A6J53_03260) | - | 518838..519263 (-) | 426 | Protein_507 | pilin | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 17727.20 Da Isoelectric Point: 9.3700
>NTDB_id=222154 A6J53_RS03290 WP_105166339.1 514269..514775(-) (pilE) [Neisseria meningitidis strain FDAARGOS_214]
MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGEWPANNSSAGVASVSTDI
KGKYVAGVKVEKGVITAQMASSGVNNEIKGKKLSLWAKRQNGSVKWFCGQPVTRTAPTTTNDDVKADTAANINTKHLPST
CRDGSGAA
MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGEWPANNSSAGVASVSTDI
KGKYVAGVKVEKGVITAQMASSGVNNEIKGKKLSLWAKRQNGSVKWFCGQPVTRTAPTTTNDDVKADTAANINTKHLPST
CRDGSGAA
Nucleotide
Download Length: 507 bp
>NTDB_id=222154 A6J53_RS03290 WP_105166339.1 514269..514775(-) (pilE) [Neisseria meningitidis strain FDAARGOS_214]
ATGAACACCCTTCAAAAAGGTTTTACCCTTATCGAGCTGATGATTGTGATTGCCATCGTCGGCATTTTGGCGGCAGTCGC
CCTTCCTGCTTATCAAGACTACACAGCCCGCGCACAAGTTTCCGAAGCCATTCTTTTGGCTGAAGGTCAAAAATCAGCCG
TCACCGAGTATTACCTGAATCACGGCGAATGGCCCGCCAACAACAGTTCTGCCGGCGTGGCATCCGTCTCCACCGACATC
AAAGGCAAATATGTTGCAGGGGTTAAAGTTGAAAAAGGCGTCATTACCGCCCAAATGGCTTCAAGCGGCGTAAACAATGA
AATCAAAGGCAAAAAACTCTCCCTGTGGGCCAAGCGTCAAAACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTACGC
GCACCGCCCCCACCACCACCAACGACGACGTCAAAGCCGACACCGCCGCCAACATCAACACCAAGCACCTGCCGTCAACC
TGCCGCGATGGAAGTGGTGCTGCCTAA
ATGAACACCCTTCAAAAAGGTTTTACCCTTATCGAGCTGATGATTGTGATTGCCATCGTCGGCATTTTGGCGGCAGTCGC
CCTTCCTGCTTATCAAGACTACACAGCCCGCGCACAAGTTTCCGAAGCCATTCTTTTGGCTGAAGGTCAAAAATCAGCCG
TCACCGAGTATTACCTGAATCACGGCGAATGGCCCGCCAACAACAGTTCTGCCGGCGTGGCATCCGTCTCCACCGACATC
AAAGGCAAATATGTTGCAGGGGTTAAAGTTGAAAAAGGCGTCATTACCGCCCAAATGGCTTCAAGCGGCGTAAACAATGA
AATCAAAGGCAAAAAACTCTCCCTGTGGGCCAAGCGTCAAAACGGTTCGGTAAAATGGTTCTGCGGACAGCCGGTTACGC
GCACCGCCCCCACCACCACCAACGACGACGTCAAAGCCGACACCGCCGCCAACATCAACACCAAGCACCTGCCGTCAACC
TGCCGCGATGGAAGTGGTGCTGCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae strain FA1090 |
82.036 |
99.405 |
0.815 |
| pilE | Neisseria gonorrhoeae MS11 |
79.167 |
100 |
0.792 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
35.602 |
100 |
0.405 |
| comP | Acinetobacter baylyi ADP1 |
38.922 |
99.405 |
0.387 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.471 |
100 |
0.369 |