Detailed information NTG0220952

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: B4X03_RS01905
• Genome accession: NZ_CP020085
• Coordinates: 403231..404358 (+)
• Length: 375 a.a.
• NCBI ID: WP_082259059.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain CL120103
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 398231..409358

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B4X03_RS01885	-	399687..400628 (-)	942	WP_021111453.1	hypothetical protein	-
B4X03_RS01890	rfaD	400720..401646 (-)	927	WP_010787340.1	ADP-glyceromanno-heptose 6-epimerase	-
B4X03_RS01895	def	401658..402170 (-)	513	WP_005712670.1	peptide deformylase	-
B4X03_RS01900	-	402388..403206 (+)	819	WP_021114360.1	Bro-N domain-containing protein	-
B4X03_RS01905	dprA	403231..404358 (+)	1128	WP_082259059.1	DNA-processing protein DprA	Machinery gene
B4X03_RS01910	-	404411..405247 (+)	837	WP_021119290.1	heme/hemin ABC transporter substrate-binding protein	-
B4X03_RS01915	-	405247..406233 (+)	987	WP_078208661.1	FecCD family ABC transporter permease	-
B4X03_RS01920	-	406233..407021 (+)	789	WP_082259060.1	heme ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 41727.69 Da
• Isoelectric Point: 5.4085

>NTDB_id=220952 B4X03_RS01905 WP_082259059.1 403231..404358(+) (dprA) [Glaesserella parasuis strain CL120103]
MTHLTKLLALLQVPQLGAQRIGRLLSEVDFGEFCQYDKTALKQMGWNERQIQRWFNPEHKWIDQALQWAEQDQQRILTLF
DEDYPFLLKQISTAPPVLFVRGNVESLSLPQIAIVGSRDYSHYGEHWAGHFSAELVKHQLAVTSGLAIGIDGFCHQRAAN
ENGITIAVLGSGLDQVYPARHKKLAEQIVETSGALVSEFFPSQPPIAENFPRRNRIISGLSLGTLVIEATVNSGSLITAR
YALEQGREVFALPNSVQNPYSEGCHKLIKEGALLVENVEDILDAIAWQRQSVHIQPSLFDTKPKQAVKSDPKFAKNLPEL
TACQQQLFEQISLEPISIDDLAKATDMAVETALIELLNLELLGVVKQVSGGYVIT

Nucleotide

• Length: 1128 bp

>NTDB_id=220952 B4X03_RS01905 WP_082259059.1 403231..404358(+) (dprA) [Glaesserella parasuis strain CL120103]
ATGACACATCTCACAAAATTATTAGCCCTGTTACAAGTGCCACAGCTTGGCGCACAACGTATCGGGCGGTTACTCTCGGA
AGTGGACTTTGGCGAATTTTGTCAATATGACAAAACCGCATTAAAGCAAATGGGCTGGAATGAACGGCAAATTCAGCGTT
GGTTTAATCCTGAGCATAAATGGATCGATCAGGCGTTGCAATGGGCGGAACAGGATCAGCAACGGATTTTAACTTTATTT
GACGAAGATTATCCTTTCTTGCTGAAGCAGATCAGCACCGCTCCCCCTGTGCTTTTTGTGCGTGGGAATGTTGAAAGTTT
ATCGTTACCGCAGATAGCTATCGTCGGCAGTCGAGATTACTCCCACTATGGCGAACACTGGGCAGGGCATTTTTCGGCGG
AATTAGTGAAACATCAGCTTGCTGTCACTAGTGGTTTAGCCATAGGCATAGACGGATTTTGTCATCAGCGTGCGGCCAAT
GAAAACGGGATTACTATTGCGGTTTTAGGCAGTGGTTTAGACCAAGTCTATCCTGCCCGCCACAAAAAACTTGCTGAACA
AATCGTTGAAACAAGCGGTGCGTTAGTGTCGGAATTTTTCCCTAGCCAGCCACCGATTGCTGAGAATTTCCCTAGACGAA
ATCGTATTATCAGCGGATTATCTCTCGGCACATTGGTTATTGAAGCCACGGTGAACAGTGGCTCGCTCATCACTGCTCGT
TATGCGTTAGAGCAAGGACGAGAAGTTTTTGCATTGCCGAACTCAGTACAAAACCCGTATAGCGAAGGGTGCCATAAATT
GATTAAAGAAGGGGCATTGCTGGTTGAAAATGTTGAAGATATTTTAGATGCGATTGCGTGGCAACGGCAGTCAGTGCATA
TTCAACCAAGTCTATTTGATACGAAACCTAAACAAGCGGTGAAATCCGACCCTAAATTTGCAAAAAATCTACCTGAACTG
ACCGCTTGTCAGCAACAATTGTTTGAACAGATTAGCCTTGAGCCGATCAGCATTGATGATCTTGCCAAAGCGACGGATAT
GGCGGTAGAAACCGCATTGATTGAGCTGCTGAATTTGGAGTTGTTGGGCGTAGTGAAGCAGGTGAGTGGGGGGTATGTAA
TCACTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (69-276)

• DprA winged helix domain (DprA_WH) (313-371)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	98.667	100	0.987
dprA	Haemophilus influenzae Rd KW20	53.235	90.667	0.483
dprA	Vibrio campbellii strain DS40M4	47.185	99.467	0.469
dprA	Vibrio cholerae strain A1552	44.681	100	0.448
dprA	Legionella pneumophila strain ERS1305867	39.947	100	0.403
dprA	Neisseria gonorrhoeae MS11	43.312	83.733	0.363