Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   B5D85_RS10340 Genome accession   NZ_CP020082
Coordinates   702108..702284 (+) Length   58 a.a.
NCBI ID   WP_418347414.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain STAB120304     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 697108..707284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B5D85_RS03725 (B5D85_03720) - 698568..699167 (+) 600 WP_042765801.1 glycoside hydrolase family 73 protein -
  B5D85_RS03730 (B5D85_03725) - 699319..700026 (+) 708 WP_002990206.1 glycoside hydrolase family 73 protein -
  B5D85_RS03735 - 700083..700373 (-) 291 Protein_677 IS3 family transposase -
  B5D85_RS03740 (B5D85_03735) - 700598..700942 (-) 345 WP_148263011.1 exotoxin beta-grasp domain-containing protein -
  B5D85_RS03745 (B5D85_03740) - 700983..702008 (-) 1026 WP_014407497.1 IdeS/Mac family cysteine endopeptidase -
  B5D85_RS10340 prx 702108..702284 (+) 177 WP_418347414.1 Paratox Regulator
  B5D85_RS03750 (B5D85_03745) - 702511..702713 (+) 203 Protein_681 nucleoside-diphosphate kinase -
  B5D85_RS03755 (B5D85_03750) - 702915..703295 (+) 381 WP_002985011.1 DUF1149 family protein -
  B5D85_RS03760 (B5D85_03755) - 703295..704143 (+) 849 WP_076639701.1 DegV family protein -
  B5D85_RS03765 (B5D85_03760) - 704268..705476 (+) 1209 WP_161237363.1 CCA tRNA nucleotidyltransferase -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6740.65 Da        Isoelectric Point: 5.0493

>NTDB_id=220942 B5D85_RS10340 WP_418347414.1 702108..702284(+) (prx) [Streptococcus pyogenes strain STAB120304]
MFNKRKQAIDNGDITSDTVVVVLKNGRFFDDMFPHEEVSNRRAVIEERGEEALMKLDK

Nucleotide


Download         Length: 177 bp        

>NTDB_id=220942 B5D85_RS10340 WP_418347414.1 702108..702284(+) (prx) [Streptococcus pyogenes strain STAB120304]
ATTTTTAATAAACGTAAACAAGCGATTGACAATGGAGATATCACAAGTGATACAGTAGTGGTTGTGCTTAAAAATGGACG
GTTTTTTGATGATATGTTTCCGCATGAGGAAGTGAGCAATAGGAGAGCTGTGATAGAAGAAAGAGGGGAAGAAGCGTTGA
TGAAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

54.386

98.276

0.534
  prx Streptococcus pyogenes MGAS315

52.632

98.276

0.517
  prx Streptococcus pyogenes MGAS8232

47.368

98.276

0.466
  prx Streptococcus pyogenes MGAS315

45.614

98.276

0.448
  prx Streptococcus pyogenes MGAS315

53.846

67.241

0.362

Multiple sequence alignment