Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   B5D85_RS01365 Genome accession   NZ_CP020082
Coordinates   249828..250589 (+) Length   253 a.a.
NCBI ID   WP_002986029.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain STAB120304     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 244828..255589
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B5D85_RS01350 (B5D85_01350) - 245086..246654 (-) 1569 WP_076639370.1 ABC transporter substrate-binding protein/permease -
  B5D85_RS01355 (B5D85_01355) - 246852..248777 (+) 1926 Protein_214 DUF2207 family protein -
  B5D85_RS01360 (B5D85_01360) - 248843..249682 (+) 840 WP_011528245.1 undecaprenyl-diphosphate phosphatase -
  B5D85_RS01365 (B5D85_01365) mecA 249828..250589 (+) 762 WP_002986029.1 adaptor protein MecA Regulator
  B5D85_RS01370 (B5D85_01370) - 250596..251765 (+) 1170 WP_014407298.1 glycosyltransferase family 4 protein -
  B5D85_RS01375 (B5D85_01375) sufC 251887..252657 (+) 771 WP_002986023.1 Fe-S cluster assembly ATPase SufC -
  B5D85_RS01380 (B5D85_01380) sufD 252752..254014 (+) 1263 WP_020904896.1 Fe-S cluster assembly protein SufD -
  B5D85_RS01385 (B5D85_01385) - 254045..255271 (+) 1227 WP_011054183.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 253 a.a.        Molecular weight: 29051.72 Da        Isoelectric Point: 4.1622

>NTDB_id=220897 B5D85_RS01365 WP_002986029.1 249828..250589(+) (mecA) [Streptococcus pyogenes strain STAB120304]
MEMKQISETTLKITISMDDLEERGMELKDFLIPQEKTEEFFYSVMDELDLPDNFKDSGMLSFRVTPRKDRLDVFVTKSEI
NKDINLEDLAEFGDMSQMTPEDFFKSLEQSMREKGDVKAHEKLEKIEEIMEDVVEATLANQSEAADPSTNHESEPLDYVH
YVLDFSTITEAVAFAKTIDFSIEASELYKGSNCYHMTILLDVQQQPSYFANVMYARLIEHANPGSKTRAYLQEHGLQLML
DGAVEQLQKIELG

Nucleotide


Download         Length: 762 bp        

>NTDB_id=220897 B5D85_RS01365 WP_002986029.1 249828..250589(+) (mecA) [Streptococcus pyogenes strain STAB120304]
ATGGAAATGAAACAAATTAGCGAGACAACGCTAAAAATAACAATTAGTATGGACGATTTAGAAGAAAGAGGAATGGAGTT
GAAAGATTTCTTGATTCCTCAAGAAAAAACAGAAGAGTTTTTCTATTCTGTGATGGACGAACTCGATCTTCCAGATAATT
TTAAAGATAGTGGTATGCTTAGTTTTCGAGTGACTCCACGCAAGGACCGTCTAGATGTTTTTGTTACCAAATCTGAGATA
AATAAAGATATTAATCTTGAAGATTTAGCAGAGTTTGGTGATATGTCCCAAATGACTCCGGAAGATTTTTTCAAGAGCTT
GGAGCAATCCATGCGTGAAAAGGGAGATGTCAAAGCTCATGAAAAATTGGAAAAAATTGAAGAGATAATGGAAGATGTTG
TTGAAGCTACTCTAGCTAATCAGTCTGAAGCGGCTGATCCATCAACTAATCATGAGTCAGAACCTTTAGATTATGTCCAT
TATGTATTGGATTTTTCAACGATTACAGAGGCAGTGGCTTTTGCTAAAACGATTGATTTTTCGATAGAAGCTTCAGAGTT
ATATAAGGGGAGCAACTGCTACCATATGACTATTTTATTAGATGTTCAGCAACAACCATCTTATTTTGCGAATGTCATGT
ATGCGAGATTGATTGAGCATGCAAACCCTGGATCAAAAACAAGAGCTTATTTACAAGAGCACGGCTTACAATTGATGCTT
GATGGTGCTGTTGAGCAATTACAAAAGATTGAGTTGGGCTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-247)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus mutans UA159

63.2

98.814

0.625
  mecA Streptococcus thermophilus LMD-9

56.225

98.419

0.553
  mecA Streptococcus thermophilus LMG 18311

55.422

98.419

0.545
  mecA Streptococcus pneumoniae Rx1

48.235

100

0.486
  mecA Streptococcus pneumoniae D39

48.235

100

0.486
  mecA Streptococcus pneumoniae R6

48.235

100

0.486
  mecA Streptococcus pneumoniae TIGR4

48.235

100

0.486

Multiple sequence alignment