Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | RS_RS02790 | Genome accession | NC_003295 |
| Coordinates | 601951..602472 (+) | Length | 173 a.a. |
| NCBI ID | WP_011000516.1 | Uniprot ID | Q8Y1Y0 |
| Organism | Ralstonia pseudosolanacearum GMI1000 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 596951..607472
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RS_RS02765 (RS04913) | recX | 597330..597809 (+) | 480 | WP_011000511.1 | recombination regulator RecX | - |
| RS_RS02770 (RS04912) | - | 598084..598710 (+) | 627 | WP_011000512.1 | DUF2889 domain-containing protein | - |
| RS_RS02775 (RS04911) | sucC | 598777..599943 (+) | 1167 | WP_011000513.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| RS_RS02780 (RS04910) | sucD | 600028..600909 (+) | 882 | WP_011000514.1 | succinate--CoA ligase subunit alpha | - |
| RS_RS02785 (RS04909) | - | 601059..601757 (+) | 699 | WP_011000515.1 | TerC family protein | - |
| RS_RS02790 (RS04908) | pilA | 601951..602472 (+) | 522 | WP_011000516.1 | pilin | Machinery gene |
| RS_RS02795 (RS04907) | pilA | 602739..603245 (+) | 507 | WP_011000517.1 | pilin | Machinery gene |
| RS_RS02800 (RS04906) | - | 603327..605060 (+) | 1734 | WP_043876542.1 | PglL family O-oligosaccharyltransferase | - |
| RS_RS02805 (RS04905) | moaC | 605289..605765 (-) | 477 | WP_011000519.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 17844.54 Da Isoelectric Point: 10.0311
>NTDB_id=21857 RS_RS02790 WP_011000516.1 601951..602472(+) (pilA) [Ralstonia pseudosolanacearum GMI1000]
MASKHSRNRRRGQRGFTLIELMIVVAIIGILAALAIPAYQDYTIRSRVVEGLALAGQAKALVVENAANAQSSLSLGSASL
PASKNVSALNIDSSTGEIAVVYAPAVTEAGANTLVLTPYSGSSSVFGNLQAGSTPPAMVLWVCAAAGKSMPVNTVTQRTT
ATLPPKYAPSECR
MASKHSRNRRRGQRGFTLIELMIVVAIIGILAALAIPAYQDYTIRSRVVEGLALAGQAKALVVENAANAQSSLSLGSASL
PASKNVSALNIDSSTGEIAVVYAPAVTEAGANTLVLTPYSGSSSVFGNLQAGSTPPAMVLWVCAAAGKSMPVNTVTQRTT
ATLPPKYAPSECR
Nucleotide
Download Length: 522 bp
>NTDB_id=21857 RS_RS02790 WP_011000516.1 601951..602472(+) (pilA) [Ralstonia pseudosolanacearum GMI1000]
ATGGCATCGAAGCACAGCAGGAACAGGCGGCGCGGCCAGCGCGGCTTTACATTGATCGAGTTGATGATCGTGGTGGCGAT
CATTGGGATATTGGCGGCGCTGGCGATTCCGGCGTATCAGGACTACACGATCCGGTCGCGTGTGGTCGAGGGGCTGGCAC
TGGCAGGGCAAGCCAAGGCGCTGGTGGTTGAAAATGCCGCCAACGCACAGAGTAGCCTGTCACTCGGTTCCGCATCGTTG
CCGGCCAGCAAGAACGTCAGTGCGCTGAATATTGATTCGTCCACCGGCGAAATCGCAGTGGTCTATGCACCCGCTGTTAC
GGAAGCGGGGGCGAATACGTTGGTATTGACCCCATACTCCGGCAGTTCGTCAGTATTTGGCAATTTGCAGGCAGGTTCAA
CGCCGCCGGCAATGGTGCTGTGGGTGTGTGCCGCCGCCGGCAAGTCGATGCCGGTCAATACCGTTACCCAGAGGACGACG
GCTACGTTGCCACCGAAATACGCGCCCTCGGAGTGCCGTTGA
ATGGCATCGAAGCACAGCAGGAACAGGCGGCGCGGCCAGCGCGGCTTTACATTGATCGAGTTGATGATCGTGGTGGCGAT
CATTGGGATATTGGCGGCGCTGGCGATTCCGGCGTATCAGGACTACACGATCCGGTCGCGTGTGGTCGAGGGGCTGGCAC
TGGCAGGGCAAGCCAAGGCGCTGGTGGTTGAAAATGCCGCCAACGCACAGAGTAGCCTGTCACTCGGTTCCGCATCGTTG
CCGGCCAGCAAGAACGTCAGTGCGCTGAATATTGATTCGTCCACCGGCGAAATCGCAGTGGTCTATGCACCCGCTGTTAC
GGAAGCGGGGGCGAATACGTTGGTATTGACCCCATACTCCGGCAGTTCGTCAGTATTTGGCAATTTGCAGGCAGGTTCAA
CGCCGCCGGCAATGGTGCTGTGGGTGTGTGCCGCCGCCGGCAAGTCGATGCCGGTCAATACCGTTACCCAGAGGACGACG
GCTACGTTGCCACCGAAATACGCGCCCTCGGAGTGCCGTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
51.705 |
100 |
0.526 |
| pilA2 | Legionella pneumophila str. Paris |
44.848 |
95.376 |
0.428 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
44.242 |
95.376 |
0.422 |
| comP | Acinetobacter baylyi ADP1 |
39.773 |
100 |
0.405 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
35.938 |
100 |
0.399 |